Porphyromonas cangingivalis: NCTC12856_00472
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Entry
NCTC12856_00472 CDS
T06514
Symbol
ramA
Name
(GenBank) (R)-stereoselective amidase
KO
K13566
omega-amidase [EC:
3.5.1.3
]
Organism
pcag
Porphyromonas cangingivalis
Pathway
pcag00250
Alanine, aspartate and glutamate metabolism
pcag01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NCTC12856_00472 (ramA)
Enzymes [BR:
pcag01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.3 omega-amidase
NCTC12856_00472 (ramA)
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GFIT
Motif
Pfam:
CN_hydrolase
Motif
Other DBs
NCBI-ProteinID:
VEJ02561
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All DBs
Position
1:557447..558247
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AA seq
266 aa
AA seq
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MRTKDRINVALIQMQQVQCDIDQNISHLQSIIERESIDGVDLILLPEMWTTGFVTKMEDG
LSDAYTRGLKTMRELSLRYGCAVYGSLLKLLDNGRLANAGVFVDVSEGIEEEYHKVHLFG
PGGEAKFFEPGERRCLVDWRGWKIFLSICYDLRFPVWMRYSQEMPYDMLLCTANWPYPRQ
EAWKMLLRARAIDNQAYVLGCNRVGQGPKTLIYPGDSVIAGPKGDLLHEIVNDEERVMRV
TLDKSELSSFREVFPVLQDADPFELL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgagaactaaagataggattaatgttgccctcatccagatgcagcaagtacagtgtgat
atcgatcaaaatatctctcacttgcagtcgatcatagagcgagagtctatcgatggggtg
gatttgatccttttgcctgagatgtggacaacgggcttcgtgacaaagatggaggatggg
ctctcagatgcttacactcgtggtctaaaaacaatgagagagctctctctgagatatggt
tgtgccgtctacggcagcctgctcaaactcttggacaatggacgacttgccaatgccggt
gtcttcgtagatgtctctgagggtatagaagaggagtatcacaaggtacatctcttcggt
cccggtggtgaagctaagttttttgagccgggagaacgacgatgtctcgtggattggaga
ggatggaagatctttttgtctatttgctatgatttgaggtttccggtgtggatgaggtat
agccaagagatgccatatgatatgcttctttgtacggccaattggccttatccacgccag
gaggcttggaaaatgctccttcgtgcaagggcgatcgataatcaagcctatgttttgggt
tgtaacagggtggggcagggaccgaagactttgatctatcccggggactctgtcattgcc
ggacctaaaggagatttacttcacgaaatagtcaatgatgaggagcgtgtgatgagagta
actttggataaaagcgaactttctagttttagagaagtgtttccggtacttcaagatgct
gatcctttcgagttgctatga
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