Porphyromonas cangingivalis: NCTC12856_00521
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Entry
NCTC12856_00521 CDS
T06514
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pcag
Porphyromonas cangingivalis
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcag03019
]
NCTC12856_00521 (rng)
03009 Ribosome biogenesis [BR:
pcag03009
]
NCTC12856_00521 (rng)
Messenger RNA biogenesis [BR:
pcag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC12856_00521 (rng)
Ribosome biogenesis [BR:
pcag03009
]
Prokaryotic type
rRNA processing factors
NCTC12856_00521 (rng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Cytochrome_CBB3
DnaJ_CXXCXGXG
DUF6305
Tll0287-like
RcpC
Anti-TRAP
Ribonuclease_P
DUF5351
Motif
Other DBs
NCBI-ProteinID:
VEJ02653
LinkDB
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Position
1:complement(597806..599383)
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AA seq
525 aa
AA seq
DB search
MKSELIIDVQPKEVSIAVLEDKRLVELQQEKQNIEFSVGDIYLGKVKKIMPGLNAAFVDI
GHKKEAFLHYRDLGSNFLSAQSFLESHAKYGKNFSPERVKLEKEIDKDGSIADRLKPGDE
VLVEITKEAISTKGPRLSAELSFAGRYLVLLPFSDKVSVSNKIKKAEERNRLKQLILSIK
PKNVTVIVRTSAEGVKVAELDHEIRMLVKRWNNTIANIAKKKTSRILYKESSRTLSLLRD
TYSSTFTDIYINDKELAEETRDYIELIDPGKGSIVKLYKESSPIFDAFDVTKQIKHLFGK
TVTYKSGAYLVIEQTEAMHVIDVNSGNRAKGSNQQEDTAIDVNLSAAEEIARQLRLRDIG
GIIVVDFIDMSQAANRQKLFEKMNEYMKNDRAKHTVLPITKFGLMQITRQRVRQALAIET
EETCPTCHGTGQVQPSLFFTDELEQKIRHLVEYEKIKKFALHVHPYVAAYIQKRKGLVGL
GSSLYTKWRSKYGKGLTVIPDESLGMLSYEFYDGEHDSLSHFLEE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagtgaactaatcattgatgtccaacctaaagaggtatcaatcgcagtcttggaa
gataagcgattggtagagctccagcaggaaaaacaaaacatcgagttttccgtcggagat
atttatctcggaaaggttaagaaaatcatgccgggactcaatgcagctttcgtcgacatc
ggacacaaaaaagaagccttcctacattacagagatttaggaagcaactttttgtctgca
caaagcttcctcgagtctcacgccaaatatggaaagaacttctcacctgaaagagttaaa
ctggaaaaagaaatagataaggatgggtcgatagccgatcgcctcaaacccggagatgag
gttttggtagagataaccaaggaggcgatatcaacaaaaggcccaagactgtctgccgaa
ctatcctttgctgggagatacttggttctcctacccttctcggacaaagtctcagtatcc
aacaaaatcaaaaaagccgaagagcgtaaccgtctcaaacagctcatccttagcatcaag
cctaaaaatgtaaccgtcatagtacgcacttctgccgaaggggtcaaggtagcagagctt
gatcatgaaatcaggatgctcgtgaagagatggaacaacacaatagcaaatattgcaaag
aaaaagacctctcgcatactatacaaagaaagcagtcgtacgctaagtttgctaagagac
acctacagctccacattcacggatatctacatcaatgacaaagagcttgcggaagaaaca
agagactacatcgaactgatcgatccgggcaaaggaagtattgtcaagctatacaaggaa
tcaagtccgatatttgatgcctttgatgtcacaaaacagattaaacacctttttggtaaa
actgtaacctataagagtggagcatatctggtcatcgaacagacagaagcgatgcatgtg
atcgatgtaaatagcggaaatagagccaagggtagcaatcaacaagaggacacagcaata
gacgtcaatctctcagcagccgaagaaattgcaaggcagctgcgcctgagagatatcggt
ggtatcattgttgtagactttatcgatatgtcacaagctgccaatcgtcagaagctcttc
gaaaaaatgaatgagtacatgaaaaacgatagggcaaagcacacagtattgcctatcaca
aagtttggactcatgcagattacgagacagagagtaagacaggctttggcgatcgaaacc
gaggaaacttgtcccacttgccacggcacaggtcaggtacaaccatcattgttcttcacc
gatgagttggaacaaaagatccgccacttggtagagtacgaaaagatcaaaaagtttgca
ctgcatgtacatccttacgtggcagcctatatacagaagagaaaagggcttgtaggctta
ggctcttcactgtacaccaagtggagaagtaaatatggcaagggactcacagtcattccc
gatgagtctttaggaatgttgagctacgagttctatgacggcgaacacgacagtttgtcg
catttcttggaagaataa
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