Porphyromonas cangingivalis: NCTC12856_00639
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Entry
NCTC12856_00639 CDS
T06514
Symbol
gcvP
Name
(GenBank) Glycine dehydrogenase [decarboxylating]
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pcag
Porphyromonas cangingivalis
Pathway
pcag00260
Glycine, serine and threonine metabolism
pcag00630
Glyoxylate and dicarboxylate metabolism
pcag00670
One carbon pool by folate
pcag00785
Lipoic acid metabolism
pcag01100
Metabolic pathways
pcag01110
Biosynthesis of secondary metabolites
pcag01200
Carbon metabolism
Module
pcag_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NCTC12856_00639 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCTC12856_00639 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NCTC12856_00639 (gcvP)
00670 One carbon pool by folate
NCTC12856_00639 (gcvP)
Enzymes [BR:
pcag01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
NCTC12856_00639 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
VEJ02864
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Position
1:complement(721283..724138)
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AA seq
951 aa
AA seq
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MNTNDFSIRHIGISPDDEKVMLDKIGVKSIEELMKQTMPSNIFLDAPLNLPEPMTERELI
EHINELGAKNKVFSSYIGMGWYDTCTPAPIQRNILENPAWYTSYTPYQAEISQGRLEALF
NFQSMITDLTALPLTNCSLLDEATAGAEAAAMMLNTRSRAKKNAAKLFVADDVYESTLKV
IMTRCEPWDVEVVVGSLESFDFGADYFGVVLQYPNERGEIFDYKAFTEKAKAAEIKVAVA
ADLLSLVLLTPPGEWGADIVFGTTQRFGIPMYFGGPSAGYLSALDDFKRYIPGRIVGLSK
DTYGKPAYRLALQTREQHIKREKATSNICTAQALLASMAGMYAVYHGPKGLRDIAGRIHT
YAVLLAEKLEDLGYKQENKLFFDTLYISNISEVEREAIKSTALDCRVNLRYFKNGAIGIS
LDETTQETDLGTLLYIFAQGKGIETVPTVDVPSEWNGIEGGLKRTSDFLTYEVFNSYHTE
TELMRYIKRLERKDISLAHSMISLGSCTMKLNAASELFILSNPQFALMHPYAPEDQTEGY
IEMLDTLKSLLGEITGLPAVCLMPNSGASGEYAGLRTIMEYHKANGQGHRDIILLPSSAH
GTNPASAVQCGYKTVTTICDENGNIDVEDFRKKAHENKDRLAGTMITYPSTHGIFEPEIR
ELCQIVHDCGGQVYMDGANMNAQVGYTNPGFIGADVCHLNLHKTFAIPHGGGGPGVGPIC
VAKHLEAYLPSHSVMYGDDRIPVSAAPFGSAVVFGITYAYIRLLGEAGLKRSTAVAILNA
NYMAAFLEKEYGIVYTGTQGRVGHELILECRKIKEMSNIDESDIAKRLMDFGYHAPTLSF
PVHGTLMIEPTESESLAELDRFIAVMTKIRQEIQEVIDGKADKEDNVLKNAPHPQYEVVA
DEWTHAYPRSKAAFPLEYLKENKFWINVSRIDNGFGDRNLVASLACCVWNE
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaaacgacttttcaatcagacacatcgggataagccctgatgatgagaaagta
atgttggataagatcggagtgaaaagtatcgaagaactaatgaagcagaccatgccttca
aacatcttcctcgatgctcctctcaatctccctgaaccaatgaccgaacgcgaacttatc
gagcacatcaacgaacttggtgctaagaataaggtcttctcgtcatacatcggtatggga
tggtacgacacttgtacccctgctccgatccagcgtaatatcctcgaaaatccggcttgg
tatacttcttacactccatatcaggctgagatctctcaggggcgtctcgaagctctcttc
aacttccagtcgatgatcactgatctcactgctcttcctctcaccaactgctctctcctt
gacgaagccactgccggtgctgaagctgccgcaatgatgttgaacactcgcagccgtgca
aagaagaatgcagcgaagctcttcgtggcggatgatgtatatgagtctacattgaaggtg
atcatgacacgttgtgagccttgggatgtggaagtcgtcgtcggctcattggagtctttt
gacttcggtgcagactattttggtgtagtcctccaatatcctaacgaaagaggtgagatc
ttcgactacaaggcgttcaccgaaaaggcaaaggctgcagagatcaaggtggcagtcgca
gcggatctactttctcttgtcctcctcacacctcccggagaatggggagcagacatcgtg
ttcggtacaactcaacgatttggtatcccgatgtatttcggaggtccatcggcaggttat
ctttcagctcttgatgatttcaagcgttatattcccggccgtatcgttggactctcaaag
gatacttatggtaagcctgcatacagacttgcgctccaaacgagagaacagcatattaaa
agagaaaaggcaacatcaaacatctgtacagcgcaagcactcttggcttcgatggccggt
atgtatgccgtctatcatggccctaaaggcttgagagacatagcaggtcgtatccacact
tatgcagtacttttggccgaaaagctcgaagaccttggttataagcaagagaataagctt
ttctttgacaccctttatatctccaacatcagtgaggtagaacgtgaggcaatcaagtca
acagcacttgactgtcgtgtgaatcttcgttacttcaagaatggcgcgatcggtatcagc
cttgacgaaacaacacaggagactgacctgggtacacttctctatatctttgcgcaaggt
aagggtattgagactgttcctactgtggatgtgccatctgagtggaatggtatcgaaggt
ggcttgaagaggacatcagacttccttacttacgaagtcttcaacagctatcatacagag
actgagctcatgagatacatcaagagacttgaacgtaaggatatatctcttgctcactct
atgatttctttggggtcttgtacaatgaagcttaatgcggcttcagaactcttcatccta
agcaacccccaatttgcactgatgcacccttatgctcccgaagaccagaccgagggttat
atcgaaatgctcgatacactaaagtctctccttggagagatcacagggcttcctgctgtt
tgtttgatgcctaattcaggggcgtcgggtgagtatgccggccttcgtaccatcatggaa
taccacaaggcgaacggtcagggacacagagacattatcctgttgccatcgtctgctcac
ggtacaaatcctgcaagtgcagttcagtgtggctacaagaccgtgacgaccatttgtgac
gagaatggtaacattgatgttgaagacttccgcaagaaggctcatgaaaacaaggatcgt
cttgcaggtacgatgatcacttatccatctacacacggtatctttgagcctgagatccgc
gaactttgccagattgttcacgattgtggtggtcaggtctatatggacggtgcaaacatg
aatgcacaagtaggatacaccaatcccggatttatcggtgctgacgtctgtcacttgaat
ctacataagacctttgctatccctcatggtggtggtggtcccggtgtaggccccatctgt
gtggctaagcacttggaagcatatctcccttcacactctgttatgtatggggatgatcgt
attcctgtgtctgcagcaccattcggtagtgctgtcgtcttcggtatcacttacgcatat
atcagacttcttggtgaagctggtttgaagcgttcgacagccgttgcaatccttaatgcc
aactacatggctgctttccttgaaaaggaatatggtatcgtatataccggtacacaagga
cgtgtagggcatgaactcattcttgaatgtcgtaagattaaggaaatgagtaatatcgat
gaaagtgatatcgctaaacgtctcatggactttgggtatcacgcaccaaccttatcattc
cccgttcatggcacactcatgattgagccaacagagagtgaaagtcttgccgaacttgat
cgcttcatcgcagtgatgactaagatcagacaagagatccaggaggtcatcgatggtaag
gctgataaagaggataatgttcttaagaatgctccacacccacaatacgaagtggttgca
gacgaatggacacatgcttatccacgttcgaaggcggcattccctcttgaatatctcaag
gagaacaagttctggatcaatgtcagccgtatcgacaacggctttggtgaccgcaatttg
gtggcttctcttgcttgctgtgtatggaatgagtaa
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