Porphyromonas cangingivalis: NCTC12856_00738
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Entry
NCTC12856_00738 CDS
T06514
Symbol
rfbB_1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pcag
Porphyromonas cangingivalis
Pathway
pcag00521
Streptomycin biosynthesis
pcag00523
Polyketide sugar unit biosynthesis
pcag00525
Acarbose and validamycin biosynthesis
pcag00541
Biosynthesis of various nucleotide sugars
pcag01100
Metabolic pathways
pcag01110
Biosynthesis of secondary metabolites
pcag01250
Biosynthesis of nucleotide sugars
Module
pcag_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NCTC12856_00738 (rfbB_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NCTC12856_00738 (rfbB_1)
01055 Biosynthesis of vancomycin group antibiotics
NCTC12856_00738 (rfbB_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NCTC12856_00738 (rfbB_1)
00525 Acarbose and validamycin biosynthesis
NCTC12856_00738 (rfbB_1)
Enzymes [BR:
pcag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NCTC12856_00738 (rfbB_1)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
Motif
Other DBs
NCBI-ProteinID:
VEJ03041
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All DBs
Position
1:complement(843633..844706)
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AA seq
357 aa
AA seq
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MKDLRQYKKVIVVTGGAGFIGSNLLLRLVPRYPEYLFINVDALTYAGNLKNLSVLEGISN
YLFRRLDITDAEGLVTLFGEYPVTHVIHMAAESHVDRSIKDPLAFVRTNVLGTVNLLNAV
RDAWHGDFEGKLFYHVSTDEVYGSLSATDAPFTESTAYDPHSPYSASKASSDHFVRAYHD
TYGLPVVISNCSNNYGPYQFPEKLIPLCILNILRGRPIPVYGDGSQVRDWLYVDDHVDAI
DAILHKGRVGETYNIGGNNEMKNIDMVRLLIRLVDNALSREEGHSLALVTYVTDRPGHDT
RYAIDARKLSQELGFEPSYSPERGLEKTVTWYLEHQAWLEEVSSGAYQDYYRMMYEH
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacttgaggcagtacaaaaaggtcattgtggtgacgggtggagcagggtttata
ggtagcaacttgttgttgagacttgtaccgagatatccggagtacttgttcatcaatgta
gatgctctcacctatgccggcaacctcaaaaatctgtcggtactggagggcatctccaac
tatctcttccggaggttggatatcactgatgctgagggcttggtaactctgttcggcgaa
tatcctgtgactcatgtcatccatatggcggcagagagccatgtagataggagcatcaag
gatcctttggcttttgtgcgtaccaatgtcttgggtacggtaaacttgctcaatgcagtt
cgtgatgcttggcatggagattttgaaggtaagttgttttaccatgtctccacagatgaa
gtatatggcagtctgtctgccacagatgccccctttacggagagtacagcctacgatcca
cactctccatactccgccagcaaggcgagttcggatcacttcgtcagggcttatcatgat
acttacggtctgcctgtggtgatcagtaactgcagtaacaactatggaccatatcagttc
cccgaaaagcttatccccctctgtatcctcaatatcctgagaggtaggccgatccccgtt
tatggagatggctctcaggtcagagactggctgtatgtggatgatcatgtcgatgccatc
gatgctattttgcacaaggggagggtaggggagacctataatatcggtggaaataatgag
atgaagaatatcgatatggtcaggcttctgataagactggtagacaatgcactctctcgc
gaggaggggcattctctggctttggttacgtacgtgacggatcgccccggacatgacacg
aggtacgccattgacgctcggaaactcagccaagagttgggctttgagccaagttattca
cctgagagagggctggagaagaccgtgacttggtatctcgagcatcaagcgtggttggaa
gaggtatcctcgggtgcttatcaggattactaccgtatgatgtatgagcactaa
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