Porphyromonas cangingivalis: NCTC12856_01087
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Entry
NCTC12856_01087 CDS
T06514
Symbol
bspRIM
Name
(GenBank) Modification methylase BspRI
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pcag
Porphyromonas cangingivalis
Pathway
pcag00270
Cysteine and methionine metabolism
pcag01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NCTC12856_01087 (bspRIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcag03000
]
NCTC12856_01087 (bspRIM)
03032 DNA replication proteins [BR:
pcag03032
]
NCTC12856_01087 (bspRIM)
03036 Chromosome and associated proteins [BR:
pcag03036
]
NCTC12856_01087 (bspRIM)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pcag02048
]
NCTC12856_01087 (bspRIM)
Enzymes [BR:
pcag01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
NCTC12856_01087 (bspRIM)
Transcription factors [BR:
pcag03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
NCTC12856_01087 (bspRIM)
DNA replication proteins [BR:
pcag03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
NCTC12856_01087 (bspRIM)
Chromosome and associated proteins [BR:
pcag03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
NCTC12856_01087 (bspRIM)
Prokaryotic defense system [BR:
pcag02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
NCTC12856_01087 (bspRIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Cons_hypoth95
Methyltransf_15
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
VEJ03640
LinkDB
All DBs
Position
1:1229867..1231144
Genome browser
AA seq
425 aa
AA seq
DB search
MDSSILPDIKPPIAIDLFAGCGGLSLGLNRAGWKSLFAIERSPEAFATLKHNLIHKTNEP
HFIWPQWLPVKNWEINEFIATYTEELCRLKGRVDLVAGGPPCQGFSMAGRRREDDSRNKL
VLSYLDIIQKVMPKIVFFENVKGFTLPFQKSKAQNRKITYADEVKSCLEKLGYIVDKQTI
NFGDYGVPQRRARFILVALSKEHFGDNRSLAKRFFEQLEAQKENFLQHKGLSVGTTLEEA
ISDLRALHGKKKLSPKDKFEFGLYGKTEDSSYQKLMRTGVSKNDNIPDSHRFANHYPSTI
SKFEEILSLTQSDRNLCINDEIKNKFSIKKHTIIPLSSSDKAPTITTLPDDYIHYEEPRI
LTVREYARIQSFPDSYEFQGKYTTGGKLRKQETPRYTQVGNAIPPLFAEQAGLVLKEMLR
HGRDS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
ttggactctagtattttacccgatataaaacctcccatagcaattgatctttttgcaggg
tgtggaggactatctcttggtcttaatagggctgggtggaagtcattgtttgctattgag
agaagcccagaagcatttgccaccctaaaacacaatcttattcacaaaaccaatgaacct
cattttatctggccccaatggcttccggtaaagaattgggaaattaatgagtttattgcg
acatataccgaagagttgtgtaggctaaaagggcgtgtcgatctagttgcaggagggcct
ccctgccaaggcttctcaatggcaggcagaagaagagaagatgacagcagaaataagctt
gtactatcttatcttgatattatacaaaaagtgatgcctaaaatcgttttctttgaaaac
gttaaagggtttacacttcccttccaaaaatcaaaagcacagaaccgtaagattacctat
gcagatgaggttaagtcatgcctagaaaagctaggctatatcgttgacaaacagactatt
aactttggagactatggagtccctcagcgtagagctagatttattttggtcgcactctct
aaagaacacttcggagataatcgatctctagccaagagattctttgagcaactagaagct
caaaaggaaaactttctccaacataaaggacttagcgttgggactacactagaagaagct
atttctgatcttagggctcttcatgggaaaaagaagctatctcctaaagataaatttgaa
tttggattatatggaaaaacggaagatagttcctaccagaaacttatgagaacaggcgtt
tctaaaaatgataatataccagatagtcatcgattcgcaaaccactacccatctacaata
tccaagttcgaagagattctcagtttaactcaaagcgaccgtaacctctgcattaatgat
gagattaagaataagtttagcatcaagaagcatactattatccctttgagttctagtgac
aaggctccaacgataacaactctacccgatgattacattcattacgaggaaccacgaatt
cttacagtaagggaatatgcgagaattcagtcatttccagacagctatgaatttcaagga
aaatacactacaggaggtaagctaaggaaacaggaaaccccacgctatacgcaggtagga
aatgcaatacctcctctatttgccgaacaagcaggattggtacttaaagaaatgctacga
catgggagagactcttaa
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