Porphyromonas cangingivalis: NCTC12856_01228
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Entry
NCTC12856_01228 CDS
T06514
Symbol
oprF
Name
(GenBank) Outer membrane porin F precursor
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pcag
Porphyromonas cangingivalis
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcag02000
]
NCTC12856_01228 (oprF)
Transporters [BR:
pcag02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC12856_01228 (oprF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
VEJ03809
LinkDB
All DBs
Position
1:1388910..1390070
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AA seq
386 aa
AA seq
DB search
MNINIKKMLCSVALMGASIISVSAQDITIAEDTHNNKRAWEIGLGGSVFHMPRVGLKSVM
TDSKGHLIDISKRDLVFGGQIYVARELSDHFALDLQGTFGYAKDPVRTVLKDHYIGLGTL
GLQWRLGGYFGSKIIDPFVRIGAGYMYKNFRINYMDVLDGTSLNNTTESGMVDNDRTHLL
PITAGLGLNMWLNDRFGIGMQADYIHLPYKGIADPLQGSLRLMWRIGGKSKKTFVKVPVE
KIVEREVIREVEKIVSQPSTETKTMYKLFSGIYFEFASADFTTDTYRLLDEIAETLKSTP
SSRLCIIGCTDAIGTAEYNKKLSERRAKAVVDALIERGVSSQMLKWRGVGSEIAHAPKAE
SDGVRRGDRKVIVEVIENEAYWESLK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaatataaaaaagatgttatgtagtgtagccttaatgggggcttctattatt
tcagtgtcagctcaagacatcaccattgccgaggacactcataacaataaaagagcttgg
gagataggtctgggaggatcagtctttcacatgcctcgcgtggggctcaagagtgtgatg
actgacagcaaaggacatctcatagatatcagcaagagagacttggtcttcggaggacag
atatatgtcgctcgtgagctatccgatcactttgccttggatcttcaaggtacattcggt
tatgccaaagacccagtacgtacagtattgaaagaccattatataggtcttgggacactc
gggctacagtggagactgggaggctattttggatctaagatcattgacccattcgtccgc
ataggagcgggatatatgtacaagaacttccgcatcaactatatggatgtccttgacggc
acttcgctaaacaatacgactgaatccggcatggtggacaacgaccgtactcatctccta
cccatcacggcgggacttggcctcaatatgtggctcaatgatcgtttcggtatcggtatg
caagcagactatatccatctaccctacaaagggatcgctgatcctcttcagggctcgctc
cgtctcatgtggcgcatcggaggaaagtcaaagaagaccttcgtgaaagttccggtcgaa
aagattgtcgaacgcgaggtgatcagagaggtcgagaagatcgtatctcaaccatctact
gagaccaaaaccatgtacaagctcttttcaggcatctactttgagtttgcgagtgcagac
ttcacgacagacacttatagactccttgatgagatcgcagagacactcaagagcactcct
tcatcaagattgtgtatcatcggttgcacagatgccataggcactgccgagtataacaaa
aagctctccgaacgaagagccaaggcggtggtcgatgccctcattgagagaggagtatcc
tctcaaatgctcaagtggcgtggtgtcggcagtgagatcgcacatgcccctaaggcagag
tcggatggtgtacgtagaggggaccgtaaggtaatcgtcgaagtaatcgaaaatgaggct
tattgggaaagcctgaaataa
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