KEGG   Porphyromonas cangingivalis: NCTC12856_01269
Entry
NCTC12856_01269   CDS       T06514                                 
Name
(GenBank) CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG
  KO
K19117  CRISPR-associated protein Csd1
Organism
pcag  Porphyromonas cangingivalis
Brite
KEGG Orthology (KO) [BR:pcag00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pcag02048]
    NCTC12856_01269
Prokaryotic defense system [BR:pcag02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    NCTC12856_01269
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: VEJ03858
LinkDB
Position
1:1436442..1438223
AA seq 593 aa
MLKALAEYYDRLPEEKCLPPYGQENVGIAWILALSQEGKFISLQPQITSKNDPLPIYQVS
TRPITTSGIESPYFFGKISYVLGIGDKNGKKNADFVDTVNKIANFFRNDTDFQAVQQFYK
SPEDVDKAKSAYEREKKNNSFIQENALVAFSIYKPGRHTPLVAEKEELIIYRKHLDEQEQ
STLTLCSITGEEGPTTRLHPSVVGNAKLISFQENSVFDSYGKTKGDNAPINKVIADKIAK
AFKHLHTSKYNHHKDNRYKIQHIYWISQSREVNDDMIATFVDAVFDDPQDSAEIVKEILK
LSNSADSFHSDKEFHIMSYVPGEGRIAVYQWRTGIVEKVFANIWEHHQNLNTINAKGELD
EDYPPIYSLSRLLTALEYGKKGDQTRPSSTFIQHILDSIIWRRKYPRLILMRAVQKLSST
ILKLPEYHNKSKGKDYNASIDILIGLIKAYHKRNCKISIPMKLDEEFSDQAYVLGRLMRV
YQETQERALGYGLNSTVFDKFYRKALTAPQQVFPRNLESLFSAHIGKIRRKNSYLAELLQ
EKKAKLTDMLPKEKPFPAHLTIEERGRFLCGYGHQFLQDKMDQKEQKKKKNED
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgctaaaagccttggcggagtactacgaccgcctaccagaagagaaatgcttgcctccc
tatggacaagagaatgtaggtattgcctggatacttgcgcttagccaagaaggtaaattt
atatcactacaacctcagattacctctaaaaatgacccgctccctatctaccaagtttcc
actcgccctattacgacgagtggaatagaatccccatatttttttggtaagatatcatat
gtattggggattggagacaagaatggaaaaaagaatgcagactttgtagatacggtgaac
aaaattgcaaacttcttccgtaatgacactgattttcaagcggtacagcaattctacaag
agcccggaagacgtcgacaaagccaaaagtgcgtatgagagagaaaagaaaaataattct
ttcatccaagagaatgcacttgttgctttttccatttacaagccaggcagacatacccct
ctggttgcagagaaagaggagctcatcatctatcgaaagcatttggacgaacaagaacaa
tctacattgacactatgtagtattacgggagaggaggggcctaccacaagactccatcca
agtgttgttggtaatgcaaaacttatcagtttccaagaaaatagtgtattcgattcatac
ggcaagaccaaaggagataatgcccctatcaataaagtcattgcagacaaaattgcaaag
gctttcaaacatctacatacaagtaagtacaatcatcacaaagacaacagatacaaaatc
cagcacatctactggatcagtcagtccagggaagttaacgatgatatgatcgcaacattt
gtagatgccgtatttgatgaccctcaggactctgcagagatcgtaaaagagattctaaag
ttatccaatagtgctgactcttttcattctgacaaggaattccacattatgtcatatgtc
ccgggggaaggacgtatcgcagtataccaatggagaaccggcatagttgaaaaggttttt
gccaatatctgggagcatcatcaaaacctcaatacgatcaatgcaaaaggagagttggat
gaagactatcccccaatctattccctatccagactattaacagctctggaatatgggaaa
aagggagatcagacacgtccctcctcaacttttatacaacatatattggacagtattatt
tggagacgtaagtatccacgactaatactaatgagagctgtacaaaagttatcaagcact
attctgaaactaccggaatatcataataaaagtaaaggtaaagattataacgcatcaata
gatatcctaatcgggcttatcaaagcctaccataaacgcaactgtaaaataagtatacct
atgaagttagatgaagaattcagcgaccaagcctatgtcctcggtcgacttatgagagta
tatcaggagacacaagagcgtgcattaggctacggtctcaattccacggtattcgacaag
ttctaccgcaaagctttgacagccccacaacaagtctttccacgaaatctggaaagtctc
ttctctgcccacatcgggaaaatccgtcgcaagaacagctatctggcagagctccttcag
gagaagaaagccaagctgactgatatgctacccaaagaaaaaccgttccctgctcatctt
acaatagaagaacgtgggcgtttcctttgtggctacggtcatcagttccttcaagataag
atggatcaaaaagaacaaaagaagaagaaaaacgaagattaa

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