Porphyromonas cangingivalis: NCTC12856_01370
Help
Entry
NCTC12856_01370 CDS
T06514
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pcag
Porphyromonas cangingivalis
Pathway
pcag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC12856_01370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcag03400
]
NCTC12856_01370
Enzymes [BR:
pcag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NCTC12856_01370
DNA repair and recombination proteins [BR:
pcag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NCTC12856_01370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Lebercilin
SIKE
FIVAR
YfjL_C
Cauli_AT
DUF5376
FAF1
Motif
Other DBs
NCBI-ProteinID:
VEJ03985
LinkDB
All DBs
Position
1:1560525..1560764
Genome browser
AA seq
79 aa
AA seq
DB search
MATKNKTDNISKLSYDEALQEAEDILRRLENEKLPIDQVIAQSRRVASLIKHCKVKITEV
GKEVDDILDDLQDDENIRP
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaaaaacaaaacagacaacatatcaaagctctcctacgacgaagctctccaa
gaggccgaagatatcctccgtcgtctcgaaaatgagaagctacccatcgatcaagtcatc
gcacaaagccgaagagtagcatcactcatcaagcactgcaaggtcaagatcaccgaagtc
ggcaaagaagtcgatgacatcctcgatgatctgcaagacgacgagaacatccgtccctga
DBGET
integrated database retrieval system
