Porphyromonas cangingivalis: NCTC12856_01613
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Entry
NCTC12856_01613 CDS
T06514
Name
(GenBank) conjugal transfer nickase/helicase TraI
Organism
pcag
Porphyromonas cangingivalis
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Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
Viral_helicase1
PIF1
AAA_16
Helicase_RecD
AAA_25
SLFN-g3_helicase
DUF815
AAA_29
UvrD_C
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
VEJ04281
LinkDB
All DBs
Position
1:complement(1851611..1853077)
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AA seq
488 aa
AA seq
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MSAENFRARMSHFFPFEPTRTQAEVIDTLASFLHDEDYDADHAIFVLRGYAGTGKSSLIG
ALARTMLAEGRPLVLLAPTGRAAKVLQSYCGIPAHTIHRVIYRERMGANGESNFEMGYNR
GRHDTLYIVDEASMINNTPDGISPFGSGCLLDDLMDFCFSVDGAKVLFIGDDAQLPPVGT
PLSPAMDTRYLSRYTGRIFTGTLTDIVRQDEASEIVTLSHILRARIIDMEGGLSEWETPL
LPMPSGEEVKIVSGYDLPDLVESSYAQVGKEETILLTRSNKDAEEFNRQIRYRSLGYEDD
ITPGELLMVCRNNYFHTPTDAEGHPKSLFIANGELLHVERSRRTKELHGFTFREAELTDT
EGGIIHANIILESLYSGAAALTPEQRQRLFDSVVLDYPWATNKKQLYGALRKDPYLNALQ
IKYAYAMTCHKAQGGQWHDVYIHFGYLTPEMIDISFCRWLYTAMTRASSRLYFISPPDFI
FGKWTDDY
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagaaaatttcagagctcggatgagccattttttccccttcgagcccactcgg
acacaggcggaagtcatagacaccttggcctctttcctgcatgatgaggactacgatgca
gaccacgccatctttgtcttgaggggttatgccgggacgggaaaatcaagcctcatcgga
gctttggcacgcacgatgcttgccgaaggacgtcctcttgtactgcttgctcccacagga
agagcggcaaaggtacttcagagttactgcggcatccctgcacacaccatacatagagtg
atctatcgagagcgaatgggggcaaatggggaatccaacttcgagatgggctacaatcgt
ggcagacacgacaccctttatatcgtcgacgaagcctctatgatcaacaacacccccgat
ggtatcagtcccttcgggagcggctgtctccttgacgaccttatggacttttgcttcagt
gtcgatggagccaaggtgctttttatcggagacgacgcacagctccctcctgtcgggacg
ccactcagtccggcgatggacacgagatatctcagtcgctacacggggcggatcttcaca
gggacactcacagacatcgttcgtcaggacgaagccagcgagatcgttacccttagccac
attctcagggcacgtatcatcgatatggaaggaggcttgtccgagtgggaaactccactc
ctccccatgccctcgggcgaggaagtcaagatcgtctccggttacgacctccccgacctc
gtcgagagctcttatgctcaagtgggcaaagaggaaaccatccttctgacacgttcgaac
aaagatgctgaagaatttaaccgacagatacgctaccgttcgctcggttacgaggatgac
atcactcccggcgaactactcatggtttgccgaaacaactacttccatacccccacagat
gccgaagggcatccgaaaagtctctttatagccaatggcgaactgctccatgtcgagcgt
tctcgcaggacaaaggagcttcatggcttcaccttcagggaagccgaactcaccgatacc
gaaggcggtatcatccacgccaatatcatcctcgagagtctctacagcggtgcggcagcc
ctcacgcccgagcaacgccaacgtctattcgacagcgttgtcctcgactacccatgggcc
accaataaaaagcaactctatggtgctcttagaaaagatccttatctcaatgccctacag
atcaaatatgcttacgccatgacctgccacaaggcacagggcggacagtggcacgacgtc
tatatccacttcggttacctcacacccgaaatgatcgatatctcattctgccgatggtta
tacacagccatgacacgtgccagctccagactatacttcatctcaccacccgatttcatc
ttcgggaaatggacagatgattactga
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