Porphyromonas cangingivalis: NCTC12856_01691
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Entry
NCTC12856_01691 CDS
T06514
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pcag
Porphyromonas cangingivalis
Pathway
pcag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12856_01691 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcag03019
]
NCTC12856_01691 (pnp)
03016 Transfer RNA biogenesis [BR:
pcag03016
]
NCTC12856_01691 (pnp)
Enzymes [BR:
pcag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC12856_01691 (pnp)
Messenger RNA biogenesis [BR:
pcag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC12856_01691 (pnp)
Transfer RNA biogenesis [BR:
pcag03016
]
Prokaryotic type
tRNA degradation factors
NCTC12856_01691 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
RNase_II_C_S1
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
VEJ04377
LinkDB
All DBs
Position
1:1945222..1947426
Genome browser
AA seq
734 aa
AA seq
DB search
MMNVITKTIQLADGRNITIETGKLAKQADGSVTVRMGNTVLLATVCAAKDANPGVDFMPL
QVEYKEKFSAIGRFPGGFTRREGRASDYEILTCRLVDRALRPLFPDDYHAEVFVNIILFS
ADGVDMPDALAGLAASAALAVSDIPFNGPISEVRVARLEGKFVVNPTFEQLEKADMDIMV
GATIDNIMMVEGEMDEVQEADLLEAIKVAHEAIKDQCRVQLELQEAVGKTVKRTYCHEEN
DEELRADVRAKCYDKAFAVAMSGTDKHARAEAFEAIITEYKASFSEEDLEAKGGMIARYY
HDVEKEAMRRAILDHGKRLDGRDTRTIRPIWTEVDCLPGPHGSSIFTRGETQSLTTVTLG
TKSDEKLVDDVLNYGKERFLLHYNFPPFSTGEARPQRGVGRREIGHGNLAHRALKRMLPE
KYPYVVRVMSDILESNGSSSMATVCAGTLALMDAGVPMKRPVSGIAMGLISENKGQNYAI
LSDILGDEDHLGDMDFKVTGTKDGITATQMDIKVDGLSYEILENALAQAKEGRLHILGKI
TECMAEPREDLKPHAPRIESLTIPKEFIGAVIGPGGKIIQSMQEESGATINIEEVDGVGV
IEISSNNKASIDKALGMISAIVVVPEVGKTYLATVKSVMPYGVFVEFLPGKEGLLHISEV
DWKRYEAIEETGLDTGAKVDVKLLEIDPKSGKFRLSRKATIEKPEGYEERPPRRNNGEGR
PPRRNGNDKNYKSE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacgtaatcacaaaaaccatccaacttgccgatggtcgcaacattacgattgag
accggcaaacttgccaagcaagctgatggttccgtaacggttcgcatgggcaacaccgtt
ttgttggcaaccgtttgtgctgctaaagacgccaatccgggcgttgattttatgcctctt
caggtagagtataaggagaagttctccgccatcggacgttttcccggaggttttacccgt
cgtgagggtagggcttcggactacgaaatcttgacttgtcgtctcgtcgacagagctttg
cgtcccctcttccctgatgactatcacgctgaagtatttgtaaacattatactattctcc
gccgacggtgtggatatgcctgatgcgcttgcaggtcttgcagcatcggctgctcttgcg
gtgtcggatatcccattcaacggtcctatctccgaagtgagagtggctcgattggagggt
aagtttgtcgtcaatcctacattcgaacagctcgaaaaggccgacatggacatcatggtc
ggtgccaccatcgacaatatcatgatggtcgagggtgagatggacgaagtgcaggaggcg
gatctcctcgaagcgatcaaggtggcgcacgaagcgatcaaggatcagtgccgtgtgcag
ctcgaacttcaggaggctgtgggtaagaccgtcaagcgtacttactgccacgaagaaaat
gatgaagaactccgtgcggatgtccgtgcgaagtgctacgataaggcttttgccgtggcg
atgtcgggtactgacaagcatgcgagagcagaggcttttgaagcgatcatcaccgagtac
aaggcttcgttctccgaagaagatctcgaagctaagggcggcatgattgctcgttattat
cacgatgtcgagaaggaagcgatgcgtcgtgccatcctcgaccatggtaagcgtctcgat
ggtcgtgacactcgtaccatccgtcctatctggacagaggtggactgtctccccggtcct
cacggctcgtcgatcttcactcgcggtgagactcagtcactcaccacagtgaccctcggt
acaaagtcggatgagaaactcgtcgacgatgtgctcaactatggtaaggaaagattcctc
cttcactacaacttccctccattctctacgggcgaagctcgtccacaaagaggggtaggc
cgtcgtgaaatcggtcacggtaatcttgctcaccgagctctcaagcgtatgctccctgag
aagtacccttacgtggtacgtgtcatgagtgacatccttgagtcgaatggttcgtcttcg
atggcgacagtctgtgccggtacgcttgccctcatggatgcaggtgtgcctatgaagcgt
cccgtgagcggtatcgcaatgggtcttatctctgagaataagggtcagaactatgccatc
ctctccgacatcctcggtgacgaagaccacttgggcgatatggacttcaaggtgacaggt
accaaggatggtatcactgccactcagatggacatcaaggtggacggactttcgtacgaa
atccttgagaacgctctcgcacaagctaaagagggacgtctccacatccttggtaagatc
acagagtgtatggctgagcctcgcgaggatctcaagcctcatgctccacgtatcgagtcg
ctcactattccgaaagaatttatcggtgctgtcatcggccctggtggtaagatcatccag
agcatgcaggaagagagtggtgctaccatcaatatcgaagaggttgacggtgtcggtgtc
atcgagatcagcagtaacaacaaggcttctatcgacaaggctctcggcatgatcagtgct
atcgtcgtcgtccctgaagtcggtaagacttacctcgctacggtgaagtctgtgatgcct
tacggggtatttgtcgaattcttgccgggtaaggaaggtctccttcatatctccgaagtg
gactggaagcgttacgaagctatcgaagagacaggcctcgatacgggtgcaaaggtcgat
gtcaagctccttgagatcgatcctaagagtggtaagttcagactctcgcgtaaggctacc
atcgagaagcctgaaggctacgaagagcgtcctcctcgccgtaataatggcgaaggtcgt
cctcctcgtcgtaacggtaacgataagaattacaaatccgagtaa
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