Porphyromonas cangingivalis: NCTC12856_01886
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Entry
NCTC12856_01886 CDS
T06514
Symbol
clpC
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpC
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
pcag
Porphyromonas cangingivalis
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pcag03110
]
NCTC12856_01886 (clpC)
Chaperones and folding catalysts [BR:
pcag03110
]
Heat shock proteins
HSP100
NCTC12856_01886 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
NBD_SMAX1
nSTAND3
AAA_14
RuvB_N
TniB
AAA_7
Bac_DnaA
UVR
RsgA_GTPase
nSTAND6
TsaE
NACHT
Roc
DUF815
bpMoxR
IstB_IS21
Zeta_toxin
AAA_19
ATPase_2
Torsin
NTPase_1
AAA_33
KTI12
AAA_24
AAA_30
PEPCK_ATP
Motif
Other DBs
NCBI-ProteinID:
VEJ04606
LinkDB
All DBs
Position
1:2135446..2137596
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AA seq
716 aa
AA seq
DB search
MIEKDTYNDDMRMSTPQPFKEDNPEENWGDELLNNDKKEKKPTEDKTDKAPKEKGKKDTP
MLDAYGVSINDAARSGKLDPVYGREDEMMRIAQILCRKKKNNPILLGDPGVGKTAIVEAL
AQRIEEKKVPIALMDKKIVSLDLASLVAGSMYRGQFEERLKTVISELKEHPEIILYIDEI
HTIMGSGNPEGGLDAANILKPALARGEVRCIGATTMEEYRKSIEKDGAMDRRFQKVVVAA
TDEAETLNILRRLRPTYEKFHKVKYTDEALEACVKLTARYVTERQFPDKAIDALDESGAH
TFIMHQAEPTRISDLEERLKTVHEAKLLAVKNLDYELATKYRDEEKVAREELDKYIEDLK
NGVETAAPLIVDVDTVEKVVSLSTGLPLESLTRDDLKNLSGLSERLSARVIGQDHVVSDI
SSAIQRNKVGLRNPSRPIGTFLFLGSSGVGKTHLSKQIARELFGSENALIRVDMSEFMER
HAVSRLIGAPPGYVGYNEGGELTEKVLRKPYSVVLFDEIEKANPEVHNLLLQLLDDGILT
DSTGRRVNFKNTIIIMTSNVGTRQLKDFGDGIGFRDADTYDPSGVSQAVIQKALKRSFSP
EFLNRIDRIVTFNALGSDDIRKIVDLELGDLDKRLEQLNITVSYTDATKTFLAEKGYDPQ
YGARPLRRAIAKYVEDLITQEILDGNVRHGGAYIVDISHEGGEQGLRVIAPELSLS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaaaagatacatacaacgatgatatgcgtatgagcacccctcagcctttcaag
gaggacaacccggaagagaactggggcgacgagttgctcaacaacgataaaaaggagaag
aagccgaccgaagataagacggacaaagctcctaaggaaaagggtaagaaggacacaccg
atgctggatgcttacggcgtgtcgatcaatgatgccgctcgtagcggtaagctcgaccct
gtatatgggcgcgaggatgagatgatgcgtatcgctcagatcctctgccgaaagaagaaa
aataaccctatcttgctcggtgatccgggtgtagggaagacggccattgtcgaggctctc
gctcagaggatagaggagaagaaggtccccatcgcactgatggacaagaagatcgtctca
cttgatctggcaagtctcgtggcgggatcgatgtatcgtgggcagttcgaggagcgtctc
aagacagtcatctcagagctcaaggagcatccggagatcatcctctatatagatgagata
cataccatcatggggagtggtaatcccgaaggtggactcgatgccgcaaatatcctcaag
ccggctttggctcgtggtgaggtgcgttgtatcggagcgacgaccatggaggagtaccgc
aagtcgatagagaaggatggggcgatggatcgtaggtttcagaaggtggtcgtcgcagca
actgatgaggcagagacgctcaacatcctcagacgacttcgcccgacatacgagaagttt
cacaaggtcaagtacacggacgaagctctcgaggcttgtgtcaagctgaccgcaaggtat
gtcaccgagcgacagttccctgacaaagccatagatgccctcgatgagtccggagcacat
acgttcatcatgcatcaggctgagcctacacgcatctctgatttggaggagcgactcaag
acggtacatgaggcgaagctccttgcggtcaaaaatctcgactatgaattggcaacaaag
tacagggatgaggagaaggtcgctcgtgaggaactagataaatatatcgaggacttgaag
aacggagtcgagactgccgcaccactcatcgtggatgtggatacggtggagaaggtcgtg
tcgctgtctaccggattgcctttggagtcgctcactcgtgacgatctcaagaacctttca
gggctctcggagcgtctgtccgctcgtgtcatcggacaggatcatgtcgtctccgacatc
tcgagtgccatccagcgtaacaaggtaggactccgcaatccctccagaccgatcgggact
ttccttttccttggttcttcgggtgtcggtaagacccatctctccaagcagatcgcacgt
gagcttttcggtagcgaaaatgccctgatcagggtcgatatgagtgagtttatggaacgt
catgcggtgtcacgtcttatcggtgcgcctccgggatatgtgggatacaatgaggggggc
gaactgacagagaaggtcctccgtaagccgtattcggtcgtcctcttcgatgagatagag
aaggcaaaccccgaagtgcacaacctcttgcttcagctcctcgatgatggtatcctcacg
gacagtaccggtcgacgagtcaacttcaaaaacacaatcatcatcatgacttcgaatgtc
gggacacgacagctcaaggacttcggtgatggcataggcttccgtgatgcggatacttat
gatccctcgggtgtctcacaggcggtgatacagaaggctctcaagaggagtttctctccg
gagtttctcaaccgtatcgaccgaatagtgaccttcaatgccctcggatctgacgacata
cgtaagatcgtggatcttgaacttggtgacttggacaagcgtctcgaacagctcaatatc
acagtctcttataccgatgcgaccaaaaccttcttggctgaaaagggctatgatccacag
tatggtgcgagaccactgcggcgtgccatcgccaagtatgtcgaagacctcatcacacag
gagatcctcgatggcaatgtccgacatggtggtgcttacatcgtcgacatctctcatgag
ggtggcgaacagggactgagagtgattgctcccgaattgtcactgtcgtag
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