Porphyromonas cangingivalis: NCTC12856_02094
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Entry
NCTC12856_02094 CDS
T06514
Name
(GenBank) recombination protein F
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
pcag
Porphyromonas cangingivalis
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
NCTC12856_02094
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GFIT
Motif
Pfam:
AAA_15
AAA_21
SMC_N
DUF2813
AAA_23
AAA_27
DUF3226
OLD-like_TOPRIM
Motif
Other DBs
NCBI-ProteinID:
VEJ04864
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Position
1:complement(2391823..2393454)
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AA seq
543 aa
AA seq
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MKISKITIQNFRSIEKAEIEVTDFNIFVGQNNCGKTNLFEALEFFFNGYKGNLQELKYLR
DNGLEMFVEVEFCGAQDGLHNMQNEKNKTTLSSKLGEADIVSFRRCSSDSKKRQMFIRGS
EIPPGTGFDAALNDFLPKFEYITTKQYYDSVAKYSKNTPMGVMLSNVLTTILQTNQQYKE
FQEKFSALFEDDESEIKTEFDRIGNQVKIYLEKQFPDTTNVRFEVTPPAFDDLLKNFNTD
IDDGIETSAEEKGDGMQRALMLSIIQAYADFRKQNDDIGKSFIFFIDEAELHLHPMAQRK
LKEVLYELSKETDQVFINTHSSVFVAENHPNQTLFKVEKTSGKTEISIVDDSEKPYVIYD
LLGGSPADLLLPNNFIIVEGQSEFEFFTRVIKRHYWDKPSIQIIQAHGDIDQTERTINAI
EKAYTPLNNNIYGGRLVILMDLPSGQTEGGVQDFQRRYKSLVTNNQIFILNKRDIEQCYP
DCPDANDGNWRKSQAEVDAMNGKKKKQLAKRVGDQITKEQFETEMKTCYEALSRCWELSF
SSQ
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataagcaaaataacaattcaaaacttcagatctattgaaaaggctgaaatagag
gtgacagactttaatatctttgttggccagaataactgtgggaaaacaaatctttttgaa
gcattggaatttttctttaatggttataagggaaacttgcaagaactgaaatacttaaga
gacaacggactggaaatgtttgtcgaagttgaattctgtggggcgcaggatggtttgcac
aatatgcagaatgaaaagaataaaactacactatcctcaaagcttggagaggcagatatt
gttagctttcggagatgtagttcagattctaagaaacgacaaatgtttatcaggggaagt
gaaatacctccaggaacgggctttgatgcagctttaaatgattttcttccaaaatttgaa
tacataacaacaaagcagtattatgattctgttgcaaaatactcgaagaatacaccaatg
ggcgtaatgctatcgaatgtattaacaacaatcctccaaacgaatcaacagtataaagaa
tttcaagagaaattttcagccctatttgaagatgatgaatctgaaattaagactgaattc
gatagaataggaaatcaggtaaaaatttatctggaaaaacaattcccagatactaccaat
gttcgttttgaagtaaccccaccagcttttgacgacttactcaaaaacttcaataccgac
atagacgatggaattgagacctcagcggaagaaaaaggggatggaatgcaaagagcctta
atgttgtccatcatacaagcttatgctgattttaggaagcaaaatgatgacattggcaaa
tcttttattttctttattgatgaagctgaattacaccttcaccccatggcgcaaagaaag
ctcaaagaagtactatatgagctttcaaaagagacagatcaagtgtttataaatactcat
tcttcggtatttgttgctgaaaaccatcctaaccaaactctgtttaaggttgaaaagaca
agtggaaaaacagagattagcatagttgatgattcagaaaaaccatacgttatttatgat
ttattaggaggaagtcctgccgacctattactcccaaataactttatcatcgtggagggg
caaagtgaatttgagttctttacaagagtcataaaacgccattactgggacaaaccttca
atccaaattattcaagcacatggagatatagatcagacagaaagaacaataaatgcgatt
gagaaagcctatactccattaaataataatatttacggggggcgattggtcatcttgatg
gatttgccaagtggacaaactgaaggtggagtacaggatttccaaaggagatataaatct
ttagtaacgaataatcaaatctttattctgaacaagagagacattgagcaatgctaccca
gattgtcccgatgccaatgatggtaattggcgtaaatctcaggcagaagtcgatgcaatg
aatggcaaaaagaaaaaacaactagcaaagagggttggagatcagattacaaaagaacag
tttgaaactgaaatgaaaacatgttacgaggcattgagtagatgttgggagttatctttt
tcaagccaatga
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