Pasteurella canis: K7G93_000731
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Entry
K7G93_000731 CDS
T07908
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pcai
Pasteurella canis
Brite
KEGG Orthology (KO) [BR:
pcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcai03032
]
K7G93_000731 (topA)
03400 DNA repair and recombination proteins [BR:
pcai03400
]
K7G93_000731 (topA)
Enzymes [BR:
pcai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K7G93_000731 (topA)
DNA replication proteins [BR:
pcai03032
]
Prokaryotic type
DNA Topoisomerases
K7G93_000731 (topA)
DNA repair and recombination proteins [BR:
pcai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K7G93_000731 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
DUF4795
Zn_ribbon_recom
Toprim_4
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
UEC23960
LinkDB
All DBs
Position
complement(752650..755256)
Genome browser
AA seq
868 aa
AA seq
DB search
MSKSLVIVESPAKAKTINKYLGSNYVVKSSIGHIRDLPTVGSSNGEKAKPISTKGLSTEE
KLALKQEKERNALVKRMGIDPYHDWQANYHILPGKEKVVSELKSLAKKSDHIYLATDLDR
EGEAIAWHLREVIGGDDSRFSRVVFNEITKNAIKQAFDKPEQLNLDRVNAQQTRRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQPEEYWEVDVLTETQTKDIL
RLEVTQFKGKKFAPKNEQEAQNAVDFLQRSNYVVSELETKPTSSKPKAPFITSTLQQTAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALNMVRGYIKSYYGEQYLPVKPNF
YSSKDNAQEAHEAIRPSDVNTLAEMLVGMEKDATRLYDLIWRQFVACQMPAAQYDSTTIS
VKAGDYELKAKGRILRFDGWTKVLPALSKSAEDQVLPNVSVNDKLNLEEVLPEQHFTKPP
ARFSEAALVKELEKRGIGRPSTYAAIISTIQERGYVRVENRRFYAEKMGEIVTDRLNQSF
ADLMNYDFTANMENILDQIANGQKNWKTELNQFFKDFSEKLTQAELDELEGGMKPNSLIP
TDIDCPTCGRKMAIRTASTGVFLGCSGYALPPKERCKTTVNLIPEVELLNVLDDSSETKA
LMERKRCPKCSTAMDSYVIDPQRKIHICGNNPNCDGYVLEQGSFKIKGYDGPIVECDKCG
ADMHLKLGRFGKYMGCTNCDNTRKILKSGEVAPPKEEPTHFPELKCEKSDAYFVLRDGAS
GVFMSAHNFPKSRETRAPKVAELALYRDRLPDKLRYLADAPQQDPEGNEAIIRFSRKEKR
QYVTSEKNGKATKWIVDYINDQWIERKK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatccttggttattgttgagtcaccagcaaaagcaaaaacaatcaataaatat
cttggtagtaattacgtagtgaagtcaagtattggtcatattcgtgacttgcctacagtt
ggctcaagtaatggtgaaaaagcaaaaccgatttcaactaaaggattaagtacagaagag
aaattggcactaaagcaagaaaaagagcgtaatgcattagtgaaacgtatgggtattgac
ccttatcatgattggcaggcaaattatcacattttaccaggtaaagaaaaagtggtttct
gagttgaaatcgctagctaaaaaatctgatcatatttatcttgcgaccgatttggatagg
gaaggagaggctattgcatggcatttacgtgaagttatcggtggcgatgattcgcgtttt
agtcgtgttgtttttaatgaaattacgaagaatgcgattaaacaagcttttgataaacca
gaacaacttaatttagatcgcgttaatgcacaacaaacacgccgttttcttgatcgtgta
gtgggctttatggtttctccattattgtggaaaaaagtcgctcgaggcttatctgctggt
cgagttcaatctgttgcggtgaaattattagttgaacgtgaacgtgaaattaaggctttc
caaccagaagaatattgggaagtcgacgtactgactgaaactcaaacaaaagacatactt
cgcttagaggttacccaatttaaaggtaagaaattcgctccaaaaaatgagcaagaagca
caaaatgcggtcgattttttacaaagatctaattatgtggtttcagaattagaaactaag
ccaacaagctctaaaccaaaagcaccttttattacttcaactttacaacaaacagccagt
acacgcctaggttttggtgtgaaaaaaacaatgatgctagcacagcgcttatatgaagca
ggctatattacttatatgcgtacagactcaacaaatttaagtcaagatgcattaaatatg
gtccgtggctacattaaatcatattatggagagcagtatttgcctgttaagccaaatttt
tactcaagtaaagacaatgctcaagaggctcatgaggcgattcgtccttcagatgtaaat
acattggcagagatgttagtggggatggaaaaagatgctacccgtttatacgatctaatt
tggcgtcagtttgtagcttgccaaatgcctgctgcacaatatgatagtacaacaattagt
gtaaaagcaggtgattatgagctaaaagcgaaaggacgtattttacgctttgacggttgg
acaaaagtattgcctgcactaagcaaaagtgcagaagatcaggtattaccaaatgtgtct
gtgaacgacaaacttaatttagaagaggtgttaccagaacaacatttcactaaaccacct
gcacgtttcagtgaagcagccttagttaaagaactagaaaagcgtggtattggtcgccca
tcaacttatgctgcaattatttcaaccattcaagaacgtggttacgttcgtgtggaaaac
cgtcggttctatgcagaaaaaatgggagaaatagtgacagatcgcttaaatcaatcattt
gcagacttgatgaactatgattttacagcgaatatggaaaatattttagaccaaattgca
aatggtcaaaaaaattggaaaacagaattaaatcaattctttaaagatttttctgaaaaa
ttgactcaagcagaattagatgagcttgaaggcggaatgaagccaaatagccttatacca
accgatatagattgcccaacttgtggtcgtaaaatggcaattcgaacagcaagtacgggc
gtatttttaggctgctcaggctatgcattaccccctaaagaacgttgtaaaacaactgtt
aatttgatccctgaagttgagttattaaacgtattagatgactcttctgaaacgaaagct
ttaatggaacgtaaacgctgtccaaaatgtagtactgcgatggacagttatgttattgat
ccacaacgtaaaatccatatttgtggtaataacccaaattgtgatggttatgtattagag
cagggaagtttcaaaattaaaggctatgatggtccaatcgtagaatgtgataaatgtggc
gcagatatgcatttaaaactgggacgatttggcaaatatatgggatgtactaattgcgat
aatacccgtaaaattttaaaaagtggagaagttgcaccacctaaagaagaaccgacacac
ttcccagaattaaaatgtgaaaaatctgatgcatattttgtgcttcgagatggtgctagt
ggtgtttttatgtctgctcataatttccctaaatctcgagaaacacgtgcgcctaaagta
gcagagcttgcattatatcgtgatcgtttacctgataagttgcgttatttagcagatgcc
cctcaacaagatccagaaggtaatgaggcaattattcgcttcagccgtaaagaaaaacgt
caatacgtgacttctgaaaaaaacggaaaagcgactaaatggattgtagactatattaat
gatcaatggattgaaagaaaaaaataa
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