Pasteurella canis: K7G93_000809
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Entry
K7G93_000809 CDS
T07908
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pcai
Pasteurella canis
Brite
KEGG Orthology (KO) [BR:
pcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcai03016
]
K7G93_000809 (rnd)
Enzymes [BR:
pcai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
K7G93_000809 (rnd)
Transfer RNA biogenesis [BR:
pcai03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K7G93_000809 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
UEC24034
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All DBs
Position
complement(841098..842258)
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AA seq
386 aa
AA seq
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MNCQLKEIQNKPHFKVINTDLALAEICHIVQQKSVIALDTEFIRIRTLYPKLGLIQLYDG
EQVYLIDPIVIQNFSPFVALLANQSVLKVLHASSEDLEVFLHYFQQLPIPMRDTQIMANF
LNFPNSTGLATLIQHYFQLEIDKGASRTDWLARPLSEKQLIYAAADVWYLLPLYQRMQQE
LAKTVWQKAVEDDCNSLLIKREQSKDPELAYLSIANGWRLDSLQLMRLKLLAKWRQEEAM
KRDLALNFVVRSEHLLQVAKYNPKHTSELLELGLTTQEVRIHGKKILHLLTQVKRIQPIE
YPAPIVRIADDPRYKKTLKALQEKLKALSPRDLPIEVIASKRSLESLIKWYWLEEESVEK
LPDLLIGWRREFGLALLATLKSNEKI
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtcaattaaaagaaattcaaaataaaccgcactttaaagtgatcaatacagat
ctcgctttagctgagatttgccatatagtacagcaaaaatccgttattgctttagatact
gagtttattcgtatccgaacgctctatcctaaattaggtttaattcaactgtatgatggt
gagcaagtgtatctgattgatcctattgttatccaaaatttttcaccttttgttgcactt
ttagcgaatcagtcagtattgaaagtattacacgcgagcagtgaagatttagaagttttt
ttacactattttcaacagctgccaataccgatgcgagatacgcagattatggcaaatttt
ctcaactttcctaactcgactggcttagcaaccttaattcagcattatttccaattagaa
attgataaaggtgcatcgcgtacagattggcttgctcgccctctttctgaaaaacaattg
atttatgcagctgcagatgtatggtatttattaccactatatcaacgtatgcagcaagaa
ttagcgaaaacagtttggcaaaaagctgtcgaagatgactgtaattcactattaattaaa
agagaacaaagtaaagatcctgagttagcttatctctcgattgcaaatggatggcgtttg
gattcattacaattgatgcgccttaaacttttggcaaaatggcgacaagaagaagcaatg
aaaagagatttagcattaaattttgttgtcagatctgaacacttattgcaagttgcaaaa
tataatccaaagcatacatcagaattattggaattaggattaactacacaggaagtgcgc
attcatggtaaaaaaatattgcatctgctgacacaagtaaagcgaatccagcctattgaa
tatccagcaccaatagtacgtattgcagatgatccgcgttataaaaaaacgctaaaagca
ctgcaagaaaaactaaaagccttatctcctcgagatttacctatagaagttattgcaagt
aaacgtagtttagaaagtttaattaagtggtattggttagaagaggagtcggttgaaaag
ttaccagacttattaattggctggcgtcgggaatttggtttagcattattagcgacacta
aaaagtaatgaaaagatttaa
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