Pasteurella canis: K7G93_000963
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Entry
K7G93_000963 CDS
T07908
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pcai
Pasteurella canis
Brite
KEGG Orthology (KO) [BR:
pcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcai03032
]
K7G93_000963
03036 Chromosome and associated proteins [BR:
pcai03036
]
K7G93_000963
03400 DNA repair and recombination proteins [BR:
pcai03400
]
K7G93_000963
DNA replication proteins [BR:
pcai03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K7G93_000963
Chromosome and associated proteins [BR:
pcai03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
K7G93_000963
DNA repair and recombination proteins [BR:
pcai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
K7G93_000963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HTH_78
Motif
Other DBs
NCBI-ProteinID:
UEC24178
LinkDB
All DBs
Position
complement(1019835..1020119)
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AA seq
94 aa
AA seq
DB search
MTKSELIERLVQKNHSIAAKDVENAVKEILDQMSFALENGKRIEVRGFGSFSLHYRQPRL
GRNPKTGEQVKLDAKSVPHFKAGKELRERVDIYA
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatcagagcttattgagcgtttagttcaaaaaaatcattcaattgcagcaaaa
gatgttgaaaatgcagtaaaagaaattttggaccaaatgtcattcgccttagaaaacggt
aagcgtattgaagtgagaggatttggtagtttctctttgcattatcgtcaacctcgttta
gggcgtaatcctaaaacgggtgaacaagtgaaattagacgcaaaatctgtaccgcacttt
aaagctggtaaagagctaagagagcgtgttgatatttacgcataa
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