Pasteurella canis: K7G93_001105
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Entry
K7G93_001105 CDS
T07908
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pcai
Pasteurella canis
Pathway
pcai03410
Base excision repair
pcai03430
Mismatch repair
pcai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K7G93_001105 (recJ)
03430 Mismatch repair
K7G93_001105 (recJ)
03440 Homologous recombination
K7G93_001105 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcai03400
]
K7G93_001105 (recJ)
DNA repair and recombination proteins [BR:
pcai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
K7G93_001105 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K7G93_001105 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K7G93_001105 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UEC22401
LinkDB
All DBs
Position
complement(1182304..1184025)
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AA seq
573 aa
AA seq
DB search
MNKLIQRRIVPDGESICVDPLLDRLYRSRHIQNSQQLDRTLAALLNPQLLQGIEEAVALL
VEAYYQQQKIVIVGDFDADGATSTALTVLALQQLGFRHVTFLVPNRFEQGYGLSIAVAEQ
ALAQEVQLLITVDNGVSSVEGVTFLQQHGVKVLITDHHLPPEVLPNADAIVNPNLSNCRF
PSKSLAGVGVAFYLMLALRAKLREIGIFDQKTQPNFSDLLDLVALGTIADVVPLDQNNRI
LIYQGVSRIRASHCRCGIRALVEVANREISQLSASDLGFSIAPRLNAAGRLDNMSVGVEL
LLAEDMATARALALELDGLNQTRKEIEQGMKLEALEICRKLTALEQTLPIGIVLYQADWH
QGVLGILASRIKDQFHRPVVAFTREQEGILKGSARSVEGIHLRDALERIYSKFPDMILKF
GGHAMAAGLTIREEYLTVFQTEFNRLLSEWLGEDKLQGIIWTDGELSSQQFNLNVAERLK
QAGPWGQAFPEPVFDGEFSILQQRLVGDKHLKMMVEPKQGGPLLDAIAFNVDTRYYPDLS
IKSARLVYKVDVNEFRGNRSLQLLVDYIAPIVS
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattaattcaacgtcgaattgtgccagatggcgagtcaatttgtgtagatcct
ttattagatcgtttgtatcgttcgcgtcatattcaaaactcacaacaattagaccgcact
ttagccgcattgttaaatccacagttgttacaaggtatagaggaagctgttgcattatta
gttgaggcatattatcagcaacaaaaaattgttatagttggagactttgatgcggatggg
gcaacgagtacagcactaacagttctcgccttgcaacaattaggtttccgtcatgtcacg
tttttagtgccaaatcgctttgaacagggttatggtttaagtattgcggtagctgaacag
gctttagcgcaagaagtacaattgttaatcacagtcgataatggcgtatcctctgtagaa
ggtgttacctttttacagcaacatggcgttaaagttctcattactgatcatcatttgccc
ccagaggttttgcctaatgctgatgctattgtcaatccaaatctaagcaattgcagattt
ccatcaaaatccttagcaggtgttggtgttgccttttatttaatgctggcattacgtgct
aagttacgtgagatcggcatttttgatcaaaagacacaacctaattttagtgatttgttg
gatcttgttgcgcttgggacgattgcagatgtcgtgccattagaccaaaacaaccgtatt
ttaatttatcaaggggtgagtcgtattcgcgcttcacattgtcgttgtggcattcgtgca
ttagttgaagttgcaaatcgtgagattagtcagttgtcggcttctgatcttggtttttct
attgcaccacgtttaaatgctgctggacgattggataatatgtctgtgggtgttgagcta
ttattagcagaggatatggcaaccgcacgggcacttgccttagaactggatgggctcaat
caaacgcgtaaagaaattgaacaaggaatgaagctagaggcacttgaaatttgtcgaaaa
ttgaccgcacttgaacaaacactacctattggcattgtgctatatcaagctgattggcat
caaggggtgcttggtattttagcatcaagaattaaagatcaatttcatcgtcctgtggtt
gcatttactcgtgaacaagagggtattttaaaaggctcagcccgttcagtagaggggatt
catttacgcgatgcattggaacgtatttatagtaaattccctgatatgatcttaaagttc
ggtgggcatgcaatggcagcaggattaacgattcgtgaggaatatttaactgtatttcaa
actgaattcaatcgattgttgagtgagtggctcggagaagataaattgcaaggcattatt
tggactgatggagaattgagttcgcaacaatttaatctcaatgtagcagaaaggttaaaa
caggctggaccttgggggcaggctttcccagagcctgtttttgatggcgagtttagcatt
ttacaacagcgcctcgttggagataaacatttaaaaatgatggtagagccaaaacaaggc
ggaccattacttgatgccattgcctttaatgtcgatactcgttattatcctgatttgtct
attaagtcggcaaggttggtttataaagtagacgtgaatgaatttagaggtaatcgtagc
ttgcaattattagtcgactatattgcacctatagtaagttaa
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