Pasteurella canis: K7G93_001115
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Entry
K7G93_001115 CDS
T07908
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pcai
Pasteurella canis
Brite
KEGG Orthology (KO) [BR:
pcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcai03016
]
K7G93_001115 (rnb)
Enzymes [BR:
pcai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
K7G93_001115 (rnb)
Transfer RNA biogenesis [BR:
pcai03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K7G93_001115 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
TRAM
DUF7842
Motif
Other DBs
NCBI-ProteinID:
UEC22410
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All DBs
Position
1192169..1194145
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AA seq
658 aa
AA seq
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MFQNNPLLSQLKQQIRDSKLQVEGIVKGSDKAFGFLECDKKSYFIPPAAMKKVMHGDKIK
ALIEVIGDKEQAEPDQLLEPMLTRFVGRVHFNKDQKLQILVDHPQINHPIAASPTKLVQE
ELQEGDWVVAHLKNHPLRDNRFFFAQINEFICKSDDEFAPWWVTLARHQQSRYPVKGLAH
YEMLDQQTREDLTALYFVTIDSESTKDMDDALYIEPILTSEVQTGWRLVVAIADPTAYIP
QDSQIDKDAKQRCFTNYLPGFNIPMLPRELSDELCSLVKDEIRPALVCYINTDLAGNIVG
NPRFVSAYVQSKAKLAYNLVSDYLEQKPDAWQPENTETAQQIHWLFQFTQARIEWRKKHS
LLFKEKPDYSFILSEDGKVKDIKAEYRRTANQIVEEAMIVANICAAHYLDEQAQGGIFNT
HSGFDKKWLVSASQFLLTHLTNEENLAELSQRYSVDTLSTLTGYRQMRHDLEKINNDYVE
FRLRRFLTFAEFKSELAPHFGLGLSGYATWTSPIRKYSDIINHRLIKATLTNQSCEKPQE
DILTRLQEARRQNRLVERDIADWLYCRYLAEKVEENVIFNAEVQDITRAGLRVQLLENGA
SVFVPASTLHNNKDEIQANTDDIALYINGELIYKLGDIIQVKLTDVKEATRSIIGIVS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaaataatcctctcctttcccaattaaaacaacaaatccgagacagtaaacta
caagttgaaggtatagttaaaggttctgataaagcatttggttttcttgagtgtgataaa
aaaagctatttcatcccaccagccgcaatgaaaaaagtcatgcatggtgacaaaattaag
gcgttaattgaagtaattggtgataaagaacaagctgaaccagaccaattactcgaacct
atgttaactcgctttgttgggcgtgttcattttaataaagatcaaaaattacaaatccta
gtcgatcatccacaaataaatcacccgattgctgcaagcccaactaaattagtacaagaa
gaattacaagaaggagattgggtcgttgcccatcttaagaaccatccattacgggataat
cgtttcttttttgctcaaattaatgagtttatctgtaaaagtgatgatgaatttgcccct
tggtgggtcactctagcacgccatcaacaatcacgttatccagtaaagggtttagcgcat
tacgaaatgttagatcagcaaactcgcgaagatctaaccgcactttattttgtgactatt
gattcagaaagcacaaaagatatggatgatgcactctatatcgaacctattttaactagt
gaagttcaaactggttggagattagttgttgctatcgccgatccaactgcctatattcca
caagactcacaaattgataaagatgcaaaacaacgttgttttactaattatctacctggt
tttaacatcccaatgttaccacgtgaactgtctgatgaactctgttctttagtaaaagac
gaaattcgccctgcacttgtttgctatattaacacagatttagcaggaaacattgtaggt
aaccctcgctttgtatctgcttatgtacaatctaaagctaaactagcttataatttagtc
tctgactacctagaacaaaagccagatgcatggcaaccagaaaatacagaaacagcccaa
caaattcattggcttttccaatttacgcaagcgcgtattgagtggcgcaaaaagcactct
ttattatttaaagaaaaacctgattattcattcattctcagtgaagatggtaaagtaaaa
gacataaaggctgaataccgtcgtacggcaaatcaaattgtagaagaggcgatgatcgta
gcaaatatttgtgctgcacattatttagatgagcaagcccaaggaggtatttttaatact
catagcggatttgataaaaaatggttagtgtctgccagccaatttttattaactcatctc
actaatgaagaaaacctagctgaattaagtcaacgttattcagtggataccttatcaaca
ttaactggttatcgccaaatgcgtcatgatcttgaaaaaataaacaacgattatgttgaa
ttccgtttacgtcgtttccttacttttgctgaatttaaatctgaactcgcaccgcacttt
ggcttaggtctatctggctatgccacttggacatcacccatccgtaagtactcagatatt
attaaccatcgcctcattaaagcaacgttaaccaatcaatcttgtgaaaagccacaagag
gatatattaacccgcctacaagaagctcgccgccaaaatagactcgtcgaacgcgatatt
gcagactggctatactgtcgttatttagctgaaaaagtagaagaaaacgttatttttaat
gctgaagtacaggacatcactcgggcaggtttacgtgtacagcttcttgaaaacggtgct
tcagtctttgttccagcatcaaccttacataataacaaagatgaaatacaagcaaacact
gatgatattgctctttatatcaacggcgaacttatttataaacttggtgatataattcaa
gtaaaattaacagatgtgaaagaagcaactcgcagtattatcggaatagtaagctaa
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