KEGG   Pasteurella canis: K7G93_001350
Entry
K7G93_001350      CDS       T07908                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
pcai  Pasteurella canis
Pathway
pcai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K7G93_001350 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcai03019]
    K7G93_001350 (rhlB)
Enzymes [BR:pcai01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     K7G93_001350 (rhlB)
Messenger RNA biogenesis [BR:pcai03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     K7G93_001350 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 CMS1 UTP25_NTPase-like
Other DBs
NCBI-ProteinID: UEC22627
LinkDB
Position
complement(1449901..1451169)
AA seq 422 aa
MQNNYLTQLRFVDLPLNHKVLNALQAKGFDYCTPIQALSLPISLSGKDVAGQAQTGTGKT
MAFLTATFHHLLEHEISDTSFSQPRALILAPTRELAVQINNDAELLAQATGLKTALAYGG
DGYDKQLKAIEKGVDILIGTTGRVIDYVKQGIIRLDQIQVVVLDEADRMFDLGFIKDIRY
LLRKCPPPQQRLTMLFSATLSYKVRELAFEDMNDPEYIEIEPLQKTGHRIKEELFYPSNQ
DKMALLLTLLEEEWPERCIIFANTKYRCEDIWRYLVADGHRVGLLTGDVAQKKRLSLLKQ
FTDGQLDILVATDVAARGLHIADVTHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFAC
EEYAMNLPAIEEYIAHSIPVSQYDVNALLTLPKPYRAKRSSYSANKNTVSSSNKRHLKRH
FK
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgcaaaataattatttaacacaacttcgttttgttgatttacctttaaatcataaagtt
ttgaatgcattacaggcgaaaggctttgattattgtacgccaattcaagcactttctttg
cctattagtttgtctggaaaagatgttgcgggtcaggcgcaaacaggaacagggaaaacg
atggcatttttaactgccacttttcatcatttattagagcatgaaatatctgacacgtct
ttctcacagcctagagcattaattttagcccccacgcgtgaattagctgttcaaattaat
aatgatgctgaattattagctcaagcaacggggctaaaaacagcattagcttatggcggt
gatggttacgataagcaattaaaagcgattgaaaaaggtgttgatattttaataggcaca
actgggcgagtgattgattatgtcaagcaaggcattattcgtttagaccaaattcaagta
gtagtattagatgaagcagatcgtatgtttgatctagggtttattaaagatattcgttat
ttgttacgtaaatgtcctccgccacagcagcgcttaaccatgttattttcagctacatta
tcttataaagtacgtgagctagcgtttgaggacatgaatgatccagaatacatagaaata
gaaccattacagaaaacgggtcatcgcattaaagaagagctattttatccctctaatcaa
gacaaaatggcgttgttgttgacgctattagaggaagaatggcctgagcgttgtattatc
tttgcgaatacaaaatatcgttgtgaagacatctggcgttatttagttgcagatggtcat
cgtgtcggattattaacaggtgatgtagcacagaaaaaacgtctttcattattaaaacaa
tttacagatgggcaattagatattttggttgctacggatgtggctgctcgaggcttacat
attgcagatgttacacatgtctttaattatgatttacctgatgatcgtgaagactatgta
catcgtattggacgcacggggcgtgctggtgaaagtggtgtctcaatcagttttgcttgt
gaagagtatgcaatgaatttacctgcaattgaggaatatattgcacatagtattcctgtc
agccaatatgacgtgaatgcactcttaacattgccaaagccctatagagcgaagcgtagt
agttattcagcgaataaaaatacagtaagttcgtcaaataaacgccatctaaagcggcat
tttaaataa

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