Pasteurella canis: K7G93_001963
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Entry
K7G93_001963 CDS
T07908
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pcai
Pasteurella canis
Brite
KEGG Orthology (KO) [BR:
pcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcai03009
]
K7G93_001963 (rlmD)
Enzymes [BR:
pcai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
K7G93_001963 (rlmD)
Ribosome biogenesis [BR:
pcai03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K7G93_001963 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
PCMT
Methyltransf_25
RrnaAD
Cons_hypoth95
MTS
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_11
Methyltr_RsmB-F
Methyltransf_4
Methyltransf_32
Methyltransf_23
PrmA
Ubie_methyltran
UPF0020
Methyltransf_12
DOT1
CMAS
N6_N4_Mtase
FtsJ
DUF6263
Motif
Other DBs
NCBI-ProteinID:
UEC23188
LinkDB
All DBs
Position
complement(2090429..2091739)
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AA seq
436 aa
AA seq
DB search
MVLLYTHKQPPKNKKTFITHILDLDYQGVGVAKVQGKTWFIENALPGEKVEVRIIEEKRQ
YGQGSASKILQTNPKRQQPKCPYYGKCGGCQSQHIPLELQRETKQKALFQRLTKLQPQAM
LMPMLTGEQWHYRRRVKLSMKYNQSKNQLDIGFRQKNSQQIIHVQQCDVLENVLSQLIPK
LHNLFAMWSTPNNLGHIELVKADNGIAMLLRHSGNLSKTDRSLLLEFAEKQQLMLFLQDD
HQLQHVYGQLPYYQLDKLQLHFDVRDFIQVNPLLNSKMVNMALDWLELKETDHVLDLFCG
MGNFTIPLSYRAQHVVGIEGVEEMVHKARKNAEQNQRKNVQFYQADLDKSFADQSWATQQ
FNKILLDPPRSGAAFALKALCELNAEKILYVSCNPATLIRDTEILQQFGYRLKKVAMIDM
FPNTGHLESVSLFEKE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggttttactttacactcataaacagccacccaaaaacaagaaaacatttattacacac
attcttgatttagattatcaaggtgtcggtgttgcaaaagtacaaggcaaaacgtggttt
attgaaaatgcattacctggagaaaaagtggaagtccgtatcattgaggaaaaacgtcaa
tatggacaaggcagtgcatctaaaatcttacagactaatcctaaaagacaacaacctaaa
tgcccatattatggcaaatgtggtggttgtcaaagccaacatattcccctagagctgcaa
cgagagactaaacaaaaagcattattccaacgtttgacgaaactgcagccacaagctatg
ttgatgcctatgctaacaggagaacaatggcattatcgacgcagagttaagctaagcatg
aaatacaatcaaagcaaaaaccaactcgacattggatttcggcaaaaaaactcacagcaa
attattcacgttcagcaatgtgatgtattagaaaacgtattaagtcaactaatacctaaa
ttacataatctgtttgcaatgtggtcgactccaaacaacttagggcatatcgaacttgta
aaagcggataatggtattgctatgttattacgtcacagcggaaatttgagtaaaacagac
cgctctttattgttagaatttgctgaaaaacaacagttaatgctatttttacaagatgac
catcaactacaacacgtctatggtcagttaccttattatcagcttgataaactccaatta
cattttgatgtgcgtgattttatccaagtaaatccattgttaaatagtaaaatggtcaat
atggcattagactggttggaattgaaagaaacagatcatgtgttagatttattctgtggc
atgggtaattttacaattcccttaagctatcgagctcaacatgttgttggtatcgaaggt
gtagaggaaatggtgcataaagcccgaaaaaatgcggaacaaaaccaacgtaagaatgtc
caattttaccaagcagatttagataaatcttttgcagatcaaagctgggctacacaacaa
tttaataaaatcttactcgatccacctcgcagtggtgcggccttcgcactcaaggcatta
tgcgaactaaatgcagaaaaaatcttatatgtatcttgtaacccagcgacgttaatacga
gatactgaaattttacaacaatttggctatcgacttaaaaaagtcgcaatgattgatatg
tttcctaatacaggacacttagaatccgtcagtttatttgaaaaagaataa
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