Saccharococcus caldoxylosilyticus: BV455_00108
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Entry
BV455_00108 CDS
T07489
Symbol
yusO_1
Name
(GenBank) putative HTH-type transcriptional regulator YusO
KO
K23775
MarR family transcriptional regulator, organic hydroperoxide resistance regulator
Organism
pcal
Saccharococcus caldoxylosilyticus
Brite
KEGG Orthology (KO) [BR:
pcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcal03000
]
BV455_00108 (yusO_1)
Transcription factors [BR:
pcal03000
]
Prokaryotic type
Helix-turn-helix
MarR family
BV455_00108 (yusO_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MarR
MarR_2
HTH_27
Staph_reg_Sar_Rot
HTH_34
TrmB
HTH_24
Fe_dep_repress
HxlR
DUF7346
DnaD_N
HTH_5
HTH_IclR
HTH_11
HTH_20
HTH_Mga
PadR
RP-C
DUF1495
PheRS_DBD1
Mga
wHTH-PRTase_assc
Rrf2
ArnR1-like_WHD
HTH_26
RuvB_C
GntR
HTH_Crp_2
PCI
LpxI_N
TFIIE_alpha
DUF4093
DUF4423
HTH_AsnC-type
Dimerisation
FeoC
HTH_30
PaaX
Motif
Other DBs
NCBI-ProteinID:
QXJ36846
LinkDB
All DBs
Position
complement(85287..85727)
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AA seq
146 aa
AA seq
DB search
MEGIGKEIMYSVFRMQKALYRLVREDAARVGITEVQLMILYTLLKKENIRLNDLAEKLNL
SNSNVSGTVDRLVSAGLVARETSKQDRRAVVLSLTDRGRQAIQEAFNHESVLRKRLKRIE
ETFKEEEIVQYLSIQQKMKDILLGEE
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atggagggcattggcaaagaaattatgtattcggtgttccgaatgcaaaaggcgttatac
cgtcttgtccgcgaagatgcggcccgggtaggaattacagaagtgcagctaatgattctt
tatacgttgttaaaaaaagaaaatatccggctgaacgatttggcggaaaaattaaattta
agcaacagcaatgtcagcggtacggtcgaccgccttgtcagcgctgggctggtagcgcgg
gagacttcaaaacaagatcggcgcgctgttgtattaagtttaacagatagagggagacag
gcgattcaagaagcgtttaaccatgaatccgttttgaggaaacgattaaaaagaatcgag
gaaacctttaaggaggaagagattgtacaatatttatccatccagcaaaaaatgaaagac
attttattaggggaggagtaa
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