KEGG   Saccharococcus caldoxylosilyticus: BV455_00322
Entry
BV455_00322       CDS       T07489                                 
Symbol
polC_1
Name
(GenBank) DNA polymerase III PolC-type
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pcal  Saccharococcus caldoxylosilyticus
Pathway
pcal03030  DNA replication
pcal03430  Mismatch repair
pcal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pcal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BV455_00322 (polC_1)
   03430 Mismatch repair
    BV455_00322 (polC_1)
   03440 Homologous recombination
    BV455_00322 (polC_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcal03032]
    BV455_00322 (polC_1)
   03400 DNA repair and recombination proteins [BR:pcal03400]
    BV455_00322 (polC_1)
Enzymes [BR:pcal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BV455_00322 (polC_1)
DNA replication proteins [BR:pcal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BV455_00322 (polC_1)
DNA repair and recombination proteins [BR:pcal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BV455_00322 (polC_1)
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: QXJ37060
LinkDB
Position
complement(283084..283812)
AA seq 242 aa
MRERHRFWQRALRLLSLEIPREALSAFLDGEHSLHQEMWLRSLRKEKQQIDITTPLAEVP
FVIIDMETTGFSPQQGDEILAMAAAKTLNGIVKERYFTLVCPEKAIPPHISALTGIQAKD
VLHAPRLREALRSFLSFIHGGVMIGYHIGHDLSFLRHFLWKYYRTKWAAHFFDMQPMVEM
ILRCSCPTFDEALQYYEILCQKRHTADGDVEAMAKLWKVLLEELKQRNIETLRDLYAALS
MR
NT seq 729 nt   +upstreamnt  +downstreamnt
gtgagggagcgacatcgtttttggcagcgggcgcttcgcttgctgtcgctggaaataccg
cgcgaagcattgtctgccttcctagacggggagcattcgctgcatcaggaaatgtggctg
cgatcgctgcggaaagaaaagcagcaaatcgatataactactcctttagcggaagtgccc
tttgtaattattgacatggaaacgacggggttttctccgcagcagggcgacgaaattttg
gcgatggcggcggcgaaaacgttaaacggaatcgtaaaagagagatattttacgctcgtt
tgtccggaaaaagcgattccgccgcatatttccgcattgacgggaattcaggcgaaagac
gtcctgcatgccccgcgcctgcgggaggcgctccgttcatttttatcgtttattcatggc
ggagtaatgatcggctatcacattggccatgatttatcgtttctccgccactttctctgg
aagtattatcggaccaaatgggccgcgcactttttcgatatgcagccgatggtggaaatg
attttgcgctgttcgtgccctacgttcgatgaagcgctgcaatattacgaaattttatgc
caaaagcggcatacggctgacggcgatgttgaggcgatggcaaagctatggaaggtgtta
ttggaggaattaaagcaacgcaacattgaaacgttgcgtgatttgtatgcggcgttaagt
atgcggtaa

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