Saccharococcus caldoxylosilyticus: BV455_00613
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Entry
BV455_00613 CDS
T07489
Name
(GenBank) hypothetical protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
pcal
Saccharococcus caldoxylosilyticus
Brite
KEGG Orthology (KO) [BR:
pcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcal03021
]
BV455_00613
03009 Ribosome biogenesis [BR:
pcal03009
]
BV455_00613
Transcription machinery [BR:
pcal03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
BV455_00613
Ribosome biogenesis [BR:
pcal03009
]
Prokaryotic type
rRNA transcription factors
BV455_00613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_2
tRNA_anti-codon
KH_NusA_C
Phi-29_GP16_7
UPF0236
Motif
Other DBs
NCBI-ProteinID:
QXJ37351
LinkDB
All DBs
Position
complement(591270..592415)
Genome browser
AA seq
381 aa
AA seq
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MNTQLLDALADIIREKGISKEVVIEAIEAAIISAYKRNFGQAQNVRVDLNMETGTIRVLA
RKDVVEEVNDPRLEISLEEAQRINPNYQVGDVVEIEVTPKDFGRIAAQTAKQVVTQRVRE
AERSVIYAEFLDREEDIMTGIVQRVDPRFVYVSLGKTEALLPASEQMPNETYKPHDRIKV
YITKVEKTTKGPQIFVSRTHPGLLKRLFELEVPEIYDGTVEIKSIAREAGDRSKISVHSD
NPEVDPVGACVGPKGQRVQAIVEELHGEKIDIVRWSADPVEFVANALSPAKVLRVIVNEA
QKATTVIVPDYQLSLAIGKRGQNARLAAKLTNWKIDIKSETEAREMGIDPYAQSTLLDSE
EMPVDNENDSDQSFDLQEEIE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgcaattactcgatgccttagcggatattatccgtgaaaaaggcattagcaaa
gaagtggtaatagaagcgattgaagcagcgattatttccgcctacaagcgcaatttcggg
caggcgcaaaacgtgcgggtcgatttaaatatggagacgggtacgatccgtgtcctcgct
cgcaaagatgtagttgaagaagtcaatgatccccgtctggaaatttctttagaggaggcg
cagcggatcaatccgaattatcaagtcggcgatgtggtggagatagaagtgacgccgaaa
gattttggacgcattgcggcgcaaacggcgaaacaagtagtcacccagcgtgtgcgcgaa
gcggaacgaagcgtgatttacgccgaatttcttgaccgcgaagaagatattatgaccggg
attgtccagcgcgtcgatccacgttttgtttacgtcagcctcgggaaaacggaagcattg
ctgccggcaagcgaacaaatgccgaatgaaacatacaaaccgcatgatcgcatcaaagtg
tatattacaaaagtagaaaaaacgacaaaagggccgcaaatttttgtatcgcgcacgcac
ccgggattgctgaaacgtctttttgaactggaagttccagaaatttacgacggcacggtc
gaaattaaatccattgcccgcgaagcgggggaccgctcgaaaatttccgttcattccgac
aatccggaagtagatccggtcggggcatgtgtcggtccaaaaggacaacgcgtgcaagcg
attgtcgaagagctgcatggagaaaaaattgatatcgtccgctggtcggccgatccagtc
gaatttgtcgccaacgcattgagcccggcaaaagtgctgcgcgtcattgtcaacgaagcg
caaaaagcgacgacggtgatcgtaccggattatcagctgtcattagcgatcggcaagcgg
gggcaaaacgcgcggctggcggcgaagctgacaaactggaaaattgatattaaaagcgaa
acggaagcgcgcgagatgggaattgatccatatgcgcaatccactttgcttgattcggaa
gagatgccggttgataatgaaaatgacagcgaccaatcattcgatttacaagaggaaatc
gagtga
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