Saccharococcus caldoxylosilyticus: BV455_00927
Help
Entry
BV455_00927 CDS
T07489
Symbol
sigI
Name
(GenBank) RNA polymerase sigma factor SigI
KO
K03093
RNA polymerase sigma-I factor
Organism
pcal
Saccharococcus caldoxylosilyticus
Brite
KEGG Orthology (KO) [BR:
pcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcal03021
]
BV455_00927 (sigI)
Transcription machinery [BR:
pcal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BV455_00927 (sigI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Mga
LysM_OapA
Caprin-1_dimer
HTH_11
TraC_F_IV
Motif
Other DBs
NCBI-ProteinID:
QXJ37665
LinkDB
All DBs
Position
complement(893894..894640)
Genome browser
AA seq
248 aa
AA seq
DB search
MKSMFSILFSLKKERTIEQQVCEIQKGNQTLHNQLIQQYKPFIIKTVSSVCKRFIREEDD
ELSIGLIAFNEAIEKYSPHKGGSFISFAELLIKRRLIDYIRKEAKVREVVLHTDEEDENA
VQTYLDTKLSIDEFYKQIEQEQRREEIIHYQQVLKEFGIHFHDLVEQSPKHKDARINAIN
VAKLLVDNEELLKQLFQKKQLPIKQLENMAEVSRKTIERNRKYIIAVAIILAGDYVYLKD
YIKGVLPS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatccatgtttagcatattattttcgttaaaaaaggagagaacgatcgaacagcag
gtatgtgaaattcaaaaaggcaatcaaacgctgcataatcagcttattcagcaatataaa
ccatttattataaaaaccgtttccagcgtgtgcaagcggtttattcgtgaggaggatgat
gagctgagtatcggattgatcgcgtttaatgaagcgattgaaaaatattcgccgcataaa
ggcggctctttcatttctttcgccgagctgcttattaaaagacgtttaattgattacatc
cgcaaagaagccaaggttagggaggttgtattacatacggatgaggaagatgaaaatgct
gtgcaaacatatttagatacaaaattgtcgatagacgaattttacaaacaaatcgagcag
gagcaacgccgcgaggaaattatccattaccagcaagtgctcaaggaatttggcattcat
tttcacgaccttgttgagcaatcgccgaagcataaagatgcccgcattaacgcgatcaac
gtcgctaagttgttggttgataatgaggagctgttaaagcagctttttcaaaaaaagcaa
ttgcccattaagcaattggaaaatatggccgaagtgagccgcaagacaatagagagaaac
agaaaatacattattgcggtggccattattttagcgggagattacgtttatttaaaggat
tatataaaaggggtgcttccatcgtga
DBGET
integrated database retrieval system
