Parageobacillus caldoxylosilyticus: BV455_01071
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Entry
BV455_01071 CDS
T07489
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pcal
Parageobacillus caldoxylosilyticus
Brite
KEGG Orthology (KO) [BR:
pcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcal03400
]
BV455_01071 (sbcC)
DNA repair and recombination proteins [BR:
pcal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BV455_01071 (sbcC)
Archaeal homologous recombinant proteins
BV455_01071 (sbcC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
PAS_8
NPV_P10
MMR_HSR1
DUF4160
Motif
Other DBs
NCBI-ProteinID:
QXJ37808
LinkDB
All DBs
Position
complement(1034160..1037507)
Genome browser
AA seq
1115 aa
AA seq
DB search
MKPVSLTIAGLHSFREKQTIDFQSLCEGGVFGIFGPTGSGKSTILDAMTLALFGSVERAP
NHTQGIMNHAENELFVSFTFELENASCAKRYTVERSFKRGDEWRIKSSVCRLIEHGEEPV
VLADKLTEVNKEIEQLLGLTMKDFTRAVVLPQGKFAEFLSLKGAERRQMLQRLFHLEPYG
DQLNKKLKEKLASVSNEWNEVAAEKAGLGDASKEALEQAKQQFNTLQGLLQKRKKELHDM
ERTVERARQLWTWQKEKEELEAELARFAEKERHIRLLETKKERAEQAERIWPYWEQYEKA
LRFMEAAFAKQKELQHKLAQAKVLYGQAMRRYEQIREEKASQEPRLLAKKEQLAQAKQLA
MQIRALEAEVHELKKQKHSIELEKQKAAEQRGEAERWYERGLAKQQMLKEELQKHVRSLE
QKERIEQAHDEKLQIERAADALRHAQQLLAQKEQTREQANREWEKRKRYAETAKEKLHIL
FQRIEKTYHSVCERQWQLEKLLYRYEQQLEKERKKAEEAKTAELAAILAKQLRHGEPCPV
CGSREHPHPHVHVDPADAQMILIIEKHIKQGQLDMQQLLSLKAQLEQLAQFVGNEWTFAR
LDVSQWKVEEDVNITVEAKALQQDCLQLKEAVHQALQQWRNAESAQQATEQEIQLLEKDI
QQLQNEWQRRVDEYNQLETDWREKYPDFSLTEIDELRQQMRKQEEMVRHLQKRIDDSVSY
LENKWREKERLAEEERRLETEKVRLASLCQTKQKLVEEYRQQLIEKAGTERIEPQLRQVE
EQLQKLQAEEEQTYQTWLHMQKQYQTLEAEEKAAGQSLEEGKARYEEAKSRWLQELQKTI
FADEKEAIEAKVAEEVYFGWKQQIDDYWRKKQQVQHRLEQLAEAMQGETIDKEQWEELQA
VYREIKQQVDEAIQQLGAAQTKVEELTKKHQRFIELEKKQEQLTALLDRYKHLQSILKGN
SFVEFMAEEQLIQVTRMASERLHSLTRQRYSLEIDSQGGFLIRDDANGGVKRPVTTLSGG
ETFLTSLSLALALSAQIQLRGEYPLRFFFLDEGFGTLDAELLDTVISALEKLHTQRLSVG
VISHVQEIRSRLPKRLIVEPAEPGGRGTRVRLEVM
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagtttcgttgacgatcgcggggctgcatagcttccgcgagaagcagacgatc
gattttcaatctttatgcgaaggcggcgttttcggtattttcggcccgacgggaagcggc
aaatcgacgattttagatgcgatgacgctcgccttgttcggcagtgtcgaacgggcgcca
aaccacacacaggggatcatgaaccacgcggaaaacgagctgtttgtttcttttaccttc
gaattggaaaatgcgtcttgtgcaaagcgatatacggtagagcgcagctttaaaagaggg
gacgaatggcggataaaaagctccgtctgccgcttgatcgagcacggcgaggagccggtg
gtgcttgctgataaattgacggaagtcaataaggagatcgagcagctgctcgggttgacg
atgaaagattttacgcgcgccgtcgtgctgccgcaggggaaatttgccgagtttttatca
ctaaaaggcgctgaacggcggcaaatgttgcagcgtcttttccatttggaaccgtatggc
gaccagctaaataaaaagttaaaagaaaaattggccagtgtttcgaacgagtggaacgag
gtggctgctgaaaaagccggtttgggcgatgcttccaaagaagcattggaacaggcaaaa
cagcaattcaacaccttgcagggattattgcaaaagcggaaaaaagagttgcatgatatg
gagagaacggtagaacgggccagacagttatggacgtggcaaaaggaaaaagaagagctt
gaagcggagctggcgcgttttgccgagaaagaacgacatattcgtctattggaaacaaaa
aaagaacgggcggagcaggccgagcggatatggccgtactgggaacagtatgaaaaagcg
cttcgttttatggaagctgctttcgccaaacaaaaggagttgcagcataagcttgcacag
gcaaaggtgctttacggacaagcgatgcgccgttatgaacaaattcgcgaagaaaaggct
tcccaggagccgcgcctgttggctaaaaaagagcagctggcgcaggcaaaacaattggca
atgcaaatccgcgcgctggaagcggaagttcacgagcttaaaaaacaaaaacattcaatc
gaattagagaaacaaaaagcggcggagcagcgcggggaagcagaaagatggtatgagcgc
ggcttagcgaaacagcaaatgctgaaagaagagctgcaaaagcatgttcgttcactagaa
caaaaagagcggatcgagcaggcgcatgatgaaaaactgcaaatcgaaagagcggcagac
gcactccgccatgcgcagcaactgctggcgcaaaaggagcagacacgggagcaggcaaac
agagaatgggaaaaaagaaagcggtatgcagaaacagcaaaagagaaattacatatttta
tttcagcgcattgaaaaaacatatcattcggtttgcgagcggcaatggcagttggagaag
ctcctataccggtacgaacaacagctcgagaaagagcggaaaaaagcagaagaggcgaaa
acggcagaactggccgccattttggccaaacagctccgccacggagaaccatgccctgtc
tgcggttcgcgcgaacaccctcatccccatgtacacgttgacccggccgatgctcagatg
atcttaataatcgagaagcatatcaaacaaggacagctcgatatgcaacagctgctttct
ctcaaagctcagctggagcagctcgcgcagtttgtcggcaatgaatggacctttgcgcgt
ttggatgttagccaatggaaggtggaagaggacgtcaatattaccgtggaagcgaaggcg
ctgcaacaggactgtctgcagttaaaggaagctgtccatcaagcattacagcaatggcgc
aatgcggaatcggcgcagcaggcaacggagcaggaaatccaactgctggaaaaagatata
caacagctgcagaacgaatggcagcgccgtgtggacgaatataatcaactagagacagac
tggcgggaaaaatatcctgatttttccctgacagagatcgatgaactgcgccaacaaatg
cgcaagcaggaagagatggttcgccatttgcaaaaacggattgacgacagcgtttcatat
cttgaaaataaatggcgggaaaaagaacggctggcagaagaagagcggaggctggaaaca
gaaaaagtgcgtctcgcttctttatgccaaacgaaacaaaagttagtggaagaatatcgg
caacaattaatagaaaaggcagggacagaaagaatcgaaccgcagcttcgtcaagtagaa
gaacaactgcaaaagctgcaagcagaagaagaacaaacctatcaaacatggctgcacatg
cagaaacaatatcaaacgctagaagctgaggaaaaagcggctgggcagtcgctagaggaa
ggaaaagcacggtatgaagaggcgaaatcacgctggcttcaagaactgcaaaaaacgata
tttgctgatgaaaaagaagcaatagaagcaaaggttgcagaggaagtatatttcgggtgg
aagcaacaaatcgatgactattggcggaaaaagcagcaagtacagcatcgtcttgaacag
ctggcggaagcgatgcaaggggaaacgatcgataaggagcaatgggaagagctgcaggcg
gtatacagagagatcaagcagcaggtagatgaggcgatccagcaattaggcgccgcacaa
acgaaagtagaagagttaactaaaaaacatcagcggtttatcgagttggagaaaaagcag
gagcaactaactgccctgctcgatcgttataaacatttgcaatccattttaaagggaaac
agctttgtggagtttatggcagaagaacagctcattcaagtcacgagaatggcgtcggaa
cggctgcactcgttaactagacagcgctattcgcttgaaatcgattcacaaggagggttc
ttgatccgcgatgacgccaacggcggcgtcaagcggccggtgaccactctatcaggaggg
gaaacgtttttaacatcattatcgcttgctttggcgttatcggcgcaaattcagttacgc
ggagaatatccgctgcggtttttctttttggatgaagggtttggcacgcttgatgctgag
cttcttgacaccgtgatttccgcgctcgagaaacttcatacacagaggctgtccgttgga
gtcattagccatgtgcaggaaattcgctcccggttgccgaaacggctgattgtcgagccg
gcagagccggggggacgcggaacgcgagtgagattagaagtaatgtaa
DBGET
integrated database retrieval system
