Saccharococcus caldoxylosilyticus: BV455_01072
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Entry
BV455_01072 CDS
T07489
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pcal
Saccharococcus caldoxylosilyticus
Brite
KEGG Orthology (KO) [BR:
pcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcal03400
]
BV455_01072 (sbcD)
DNA repair and recombination proteins [BR:
pcal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BV455_01072 (sbcD)
Archaeal homologous recombinant proteins
BV455_01072 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
QXJ37809
LinkDB
All DBs
Position
complement(1037504..1038685)
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AA seq
393 aa
AA seq
DB search
MRILHTADWHLGRTLEGRSRLPEQEQFLDELADIVEQENIDVILMAGDVFDSVNPPAAAE
QLFYESLARLSDKGKRPIAVIAGNHDHPERISAARALLDDYNIFLLGWPDTSVYRIDVPA
CNETMLLAPLAYPSESRLAQLLSKEHSEAALRDRYDERIRQLFAVMAASFTEKTVNIAMS
HLYVAGGSTSDSERPIEVGGAYTVAATSLPKQAQYVALGHLHRPQDVKRAETAARYSGSP
LAYSFSESGYAKSVTIVDVKPGAKAAVSEIPLSSGKPLVRWKATDGLMQVYRWCEEGKDA
SSWIDLEIHLSEPLTMEEIYRLRKLHPGFVHIRPVFPDKEEHDTGVKQEQLSLEEMFRRF
YERQTGGHKPDDELVRLFLELVADGEEEGETEE
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattttgcataccgcggactggcatttggggagaacgctggaaggaagaagccgg
ctgccggagcaggagcagtttttagatgaactagcggacatcgttgagcaagaaaacatt
gatgtcatattaatggcaggcgatgtgtttgattcggtaaatcctccggcagcggcggaa
cagttgttttacgaaagccttgctcgcctttccgacaaaggaaaacggccgatcgcggtg
atcgccggcaaccacgatcacccggagcgcattagcgcggcgcgcgctttactcgatgat
tacaacatctttttgctcggttggccggatacgtccgtctatcgtattgatgtgccggcg
tgcaacgaaacgatgctacttgccccgcttgcctatccgtccgaatcgcgcttggcgcaa
ctgctgtcaaaagaacattccgaggcggcactacgcgatcggtatgatgagcgaatccgc
cagttatttgccgtcatggccgcttcttttacggaaaagacggttaatatcgccatgagc
cacctttatgtggcgggaggaagcacctcggattcggagcggccgatcgaggtcggaggc
gcttatacagtagctgcgacaagcctgccaaaacaagcgcagtatgttgcgctcggccat
ttgcaccggccgcaggatgtcaaacgcgcagaaacggcggcccgctactcgggatccccg
cttgcctatagcttttccgaatcgggatatgctaaatcggtgacgatcgtcgatgtaaag
ccgggagcaaaagcggccgtttcggaaattcctctctcttccggcaagccgcttgtgaga
tggaaggcgacggacgggcttatgcaagtgtaccgctggtgtgaggaaggaaaagacgcg
tcgagttggattgatttagagatccacctttccgagccgctgacaatggaagaaatttac
cgtctgcgcaagctgcatcccggttttgtacatattcgtccagttttcccagataaagaa
gagcatgacaccggtgtaaaacaagagcaattgtcattagaggaaatgttccgccgcttt
tatgaacgccaaacgggcgggcataaaccggatgacgagcttgtccgcctctttttagag
ctggtggcggacggggaagaagagggggagacggaagaatga
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