Saccharococcus caldoxylosilyticus: BV455_01073
Help
Entry
BV455_01073 CDS
T07489
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pcal
Saccharococcus caldoxylosilyticus
Brite
KEGG Orthology (KO) [BR:
pcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcal03400
]
BV455_01073 (addA)
Enzymes [BR:
pcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BV455_01073 (addA)
DNA repair and recombination proteins [BR:
pcal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BV455_01073 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
AAA_22
GxGYxYP_N
AAA_30
DEK_C
Motif
Other DBs
NCBI-ProteinID:
QXJ37810
LinkDB
All DBs
Position
complement(1038712..1042446)
Genome browser
AA seq
1244 aa
AA seq
DB search
MNVTFRPKPAESRWTNEQWKAIAAGGQDILVAAAAGSGKTAVLVERIIQKITAEEDPIDV
DRLLVVTFTNAAAAEMKARIAEALERELEKQPNSLHLRRQLSLLNRASISTIHSFCLDVI
RKYYYFIDLDPVFRIADDTEIELLKEEVMEELLEEEYGKTDNELFFDVVDRYTGDRSDAE
LQKMILAIYEFSRSHPEPQQWLDQLAAMYDIEENASVAELPYYSYLKKYVTMELSAAKRF
ITRALHLTNLPGGPLPYAENYRSDLQFIHHLETLLEQSWDELYEALQALSLSRLNSCRGN
EYDPQLIEEAKSLREQAKKKLELLRDNVFSLRPATWLRHMREMKPVVETIVRLVKRFAEM
FQAYKREKGIVDFSDLEHYCLQILRHPDSPDGQWLPSDAALDYRAQFAEVLVDEYQDTNM
VQEAILQLVKKGNEHTGNLFMVGDVKQSIYRFRLAEPLLFLSKYKRFTPDGSQSGMKIDL
ACNFRSRSEVLHGTNFIFQQIMDENVGEMDYDEAAQLKYGATDYPDYEQAVPEFIIVDRS
SKDGEETEEWNAGDLALSELEARVMAKKIKEIVSKPFYVYDRNIKQMRRAMYRDIVILLR
SMTNAPQIIEEFRAHGIPVYADLSSGYFQATEISIMLSLLKVVDNPYQDIPLAAVLRSPI
VGLNENELALIRISDKKGTFYEAMMAFLQKPAESTEEERLQEKLRSFVEQLQQWRSMARQ
RSLADVIWQLYRDTQFYDFVGALPGGKQRQANLRALYDRARQYETTSFRGLFRFLRFIER
LQERGDDLGAARTLGEQEDVVRMMTIHGSKGLEFPIVFVAGLARPFHMRDLHGPYLLDKE
LGFASRFVDPKLRISYPTLPQMAIREKKRLDFLAEEMRILYVALTRAKEKLYLVAAVKDA
EKEIAKWKSAATEEGWLLPDDVRASARCYLDWIGRALIRHRDGKRLADVPGVCEKIASHP
STWHMEVIPASQLNDENAEADQANEQIMSALKKGDPVPNIGERKEEIERLLSWRYAYEKE
TMVRAKQTVSELKRQRDIFGENADRLLLQHTFAPIFERPLFMQEKKLTPAEKGTAMHIIM
QHVDITAPVTESSVREQIAKLVQRELLTHEQAEAIDVSSVVAFFATDIGQRLCAAAEVYR
EVPFSFALSAKEVYGEGIGEERQVLVQGVIDCLFADEKGLVLIDFKTDTVTNRFDGGWSE
AKQVIISRYETQMRLYRRAVEQIWRTRVDECYLYLFDGSHLLSV
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcacgtttcgcccgaagccggcagaaagccgttggaccaatgaacagtggaaa
gcgattgccgccggcggacaggacattcttgtcgcggcagcggcgggatccggaaagacc
gctgtgcttgtcgaacggattatccaaaaaataacggcggaagaagatcctatcgatgta
gaccggctgcttgttgttacatttacgaacgcggcggcggcagaaatgaaagcaagaatt
gctgaagcgcttgaacgtgagctggagaagcagccaaactcgctccatttgcggcggcag
ctcagcttattaaaccgcgcttcgatttcgacgatccactctttctgtttggatgtgatt
cgcaaatattattatttcattgacttggatcctgtatttcgcatcgccgatgatacagaa
atcgaattgctgaaagaggaagtgatggaagagctgctcgaggaggagtacggcaagacc
gataatgagctgtttttcgatgtggtagaccgctatacaggggaccggagcgatgccgaa
ctgcagaagatgattttagcaatctatgaattttcccgctcgcatccagaaccgcagcaa
tggctcgatcagttggccgccatgtatgacatcgaggaaaatgcatcggtggcagagctt
ccatattattcttatttgaaaaaatacgtaacgatggagctgtctgcggcaaaacggttc
attacaagggcgcttcatttgacgaacttgccgggaggaccgctgccgtacgcggaaaat
tatcgcagtgatttgcagtttattcatcatttagaaacgttgttagagcagtcatgggac
gagctgtatgaagcgctgcaggctttgtcgctatcgcggttgaattcgtgccgcggcaat
gagtacgacccgcaattgatcgaagaagcgaaatcattgcgcgaacaggcgaaaaagaag
ctggaattgctgcgcgataacgtcttttcccttcgtccagccacatggcttcggcatatg
cgcgagatgaagccggttgtcgaaacgattgtgcgcttggtcaagcgctttgcggaaatg
tttcaggcatataagcgggaaaaggggattgtcgatttttccgatttggagcattattgt
ttgcaaattttacgccatccagactccccagatggacagtggcttccttccgatgcggct
ttagattaccgtgcacagtttgccgaagtgcttgttgatgagtatcaagatacgaatatg
gtgcaggaggccatcttgcagctggtgaaaaaaggaaatgaacacacgggaaatttattt
atggtcggcgacgtcaaacagtcgatttaccgtttccgtttggcagaaccgctgttgttt
ttaagcaaatataaacggttcacaccagacggaagccaatcaggaatgaaaattgattta
gcgtgcaactttcgcagccgctccgaagtgctgcatgggaccaactttatctttcagcaa
atcatggacgagaacgtcggcgagatggattatgatgaagcggcacaattaaaatatgga
gccactgactatcctgattacgagcaggctgttccggaattcatcatcgtagaccgaagc
agcaaggatggggaagaaacggaagaatggaatgccggcgacttggcgctgtcggaactt
gaagcgcgcgtgatggcgaaaaaaataaaggaaatcgtttccaagccgttttatgtgtat
gaccgcaacataaaacaaatgcgccgcgcgatgtatcgggatattgtcattttgctgcgg
tcgatgacaaacgcgccgcagatcattgaagaatttcgcgcgcatggcattccggtgtat
gcggacttatcttccggctattttcaggcgacggaaatatcgattatgctgtctctgtta
aaagtggtcgacaatccgtatcaagatataccgcttgccgccgtgttgcgttcgccgatc
gtcggcttaaacgaaaatgagttagcgctgattcgcattagcgataaaaaagggacattt
tatgaggcaatgatggcctttttacagaaaccggcagagagtacagaagaagaaaggctg
caggaaaaattgcgttcgtttgtcgaacaattacaacaatggcggtcgatggcgcggcag
cgttcactggccgatgtgatttggcagctgtatcgggatacgcagttttacgattttgtc
ggcgccctgcctggaggaaaacagcggcaggcgaatttgcgcgctctttatgaccgagcc
cgccaatatgagacaacgtcgttccgcggattgttccgttttttgcggtttatcgagcgc
ctgcaagaacggggggatgatttgggcgcggcacgcacccttggcgagcaagaagatgtt
gtgcggatgatgacgatccacggcagcaaagggctcgaatttccgatcgtgtttgtagcc
ggattagcccgcccgtttcatatgcgcgatttacacggcccatatttgcttgataaagaa
ctcggctttgcttcgcgctttgtggatccgaagcttcgcatcagttatccgacattgccg
caaatggcgatccgggagaaaaaacggcttgactttttggcggaagaaatgcggatttta
tatgtggcgttaacaagagcgaaagaaaaattgtatttagtcgctgccgtaaaagatgcg
gaaaaagaaatagccaaatggaaaagcgccgcaacggaagaaggatggctcttgcctgat
gatgtccgcgcttccgcccgctgttatttagattggatcggaagagcgcttatccgccat
cgcgatggaaagcggctggcggatgtgcccggtgtgtgcgaaaaaatcgcttcccacccg
tccacctggcatatggaagtcattccggcgagtcagttaaacgatgaaaatgcggaagcg
gaccaggcaaatgaacaaataatgtctgcgctaaaaaagggagatccggtcccgaacata
ggggaacggaaagaggaaatagagcgccttctttcgtggcggtacgcgtatgaaaaagaa
acgatggtgcgtgccaagcaaacggtatcggagttaaagcggcagcgtgacattttcggg
gaaaacgcggaccggctgctgcttcagcacactttcgcgccgatttttgaacgtccgctg
tttatgcaggagaaaaaattgacaccggcggaaaaagggacggcaatgcatatcattatg
cagcatgtagacataaccgcaccggttactgaatcgtctgttcgcgagcaaatcgcaaag
ctcgtgcaacgggagctgctgacccatgaacaggcggaagcgatcgatgtttccagcgtt
gtcgcgtttttcgcaacagacattggtcagcgcttgtgtgccgctgccgaagtgtaccgc
gaagttccgtttagcttcgcgctttcggccaaagaagtatacggcgaaggcattggtgaa
gaaagacaagtgttggtgcaaggggtgattgactgcctgtttgccgacgaaaaagggctt
gtcttaatcgattttaaaacggatacggtcaccaatcggtttgacggcggatggagtgaa
gcgaagcaggtgattatatcccgatatgaaacacaaatgcgtttataccgtcgcgctgtc
gaacaaatttggcgcacccgtgttgatgaatgctatttatatttatttgatggatcgcat
cttctttccgtttaa
DBGET
integrated database retrieval system
