Saccharococcus caldoxylosilyticus: BV455_01074
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Entry
BV455_01074 CDS
T07489
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pcal
Saccharococcus caldoxylosilyticus
Brite
KEGG Orthology (KO) [BR:
pcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcal03400
]
BV455_01074 (addB)
Enzymes [BR:
pcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BV455_01074 (addB)
DNA repair and recombination proteins [BR:
pcal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BV455_01074 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
HisKA_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
QXJ37811
LinkDB
All DBs
Position
complement(1042448..1045963)
Genome browser
AA seq
1171 aa
AA seq
DB search
MKVISMSLRFLLGRSGSGKTATCLNEIRRKLQKEPKGKPIIYLVPEQMTFQSEYALIHTP
GIGGMIRAQVFSFTRLAWRVLQETGGMNRYHINDVGMQMMIRKIVEHRKQQLQLFGRAVD
KTGFIQQLYDMITECKRYCLTPQQLRQHAQELEEHRKKPAEKVLADKLNDISMIYEELEK
SLANHYIDSEDYLRLLAEKIPQSRYLRDAEIYVDGFHQFTPQEYMVLEQLLIHCRRVTVS
LTVDAPYDERLPNELHLFYLTAKTYHDIREIALLNGISIEDPVVLEGNRRHQETELAHLE
AHYHDRPAVVYSEKNDAICVYEASNRRAEVEAIAREIVHLVRDKGYCYRDIAVIVRNTEA
YRDFIKTIFSDFHIPYFMDEKEPMRHHPLIELLRASMEVVASRWRYEAVFRAIKTDLLFP
VGEDVAALREAMDKLENYVLAYGVKGDKWTNGERWTYRRYQALEGLAIPQTDEEKQYEEK
LNQWREMVASPLLRLERRMRRAKDGRGLCEAVYLFLEELQIPKKLENMSKEAQEQGKLVE
ARHHEQVWNAVIDLLNQYVEMLGDETLPVTEFANIIETGLDRLEFALVPPAMDQVIIAQL
DRSRLIDIKCAFVIGVNDGVIPAKAKEDGLIAEAERQLLHELGARVAPGGREQLFYEPFF
IYLALTCPSERLYVTYPLANEEGKALPPSIVIKHLADLFPYLQKRVCGNDPLDAAPAEQA
SFVTAPRATQTYLVAQLQAWKRNYSIAPLWWDVYNFFIRDSNWRKQVQKAISGLFYTNET
APLKKEISKRLYGKKIQASVSRMEQFQKCPFSHFASHGLRLKERTVFRLEAPDIGQLFHS
ALKMISDRLREANTDWRHLSKQQCERLSIEAVEQVAPLIQQKVLFSSNRYYYMKRKLQNV
IARTAHVLSEHARASGFVPVGLELEFGPNGVLPPLSFRLPDGTVMELVGRIDRVDKAESS
RGVLLRVIDYKSSAKTLDLTEVYYGLALQMLTYLDIVLTYAEQLVGQEAFPAGILYFHVH
NPMIKSNQFLQDEKEIEKKLLEQFKMRGLLLEDAEAIRLMDMHIEEGKWSLVVPAQITKK
GAIHSKSSVVSETDFAYLRQHIRQLFQMIGIQIVDGAVDIAPYKLKEQTPCEFCPFKPVC
QFDESFLGNRYRLLTPQDNQAIMKKLSEGKD
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgatatccatgtcgcttcgatttctgctaggaagatcaggaagcggaaaaacg
gcaacgtgcttaaatgaaattcgccgcaaattacaaaaagagccgaaaggaaaaccgatt
atttatcttgtcccggaacaaatgacgtttcaatccgaatatgcgttgatacatacacct
ggaattggcggaatgatccgcgcacaagtatttagttttacacggctggcgtggcgggtc
ttgcaggaaacgggtggaatgaaccgatatcatattaacgatgttggcatgcagatgatg
atccgcaaaattgtggaacatcgcaagcagcaactgcaattatttgggcgtgcggttgat
aaaaccggttttattcaacagctttacgacatgattacggagtgtaaacggtattgcctt
accccacagcagctccgccaacacgcacaagagttggaggaacatcgaaaaaagcccgct
gaaaaagtgctggcagataagttaaatgatatatcgatgatttatgaggaactggaaaaa
agtttagccaatcactatatcgattcggaagactatttgcggctgcttgcggaaaaaatt
ccgcaatcgcgctacttgcgcgacgccgagatttatgtggacggctttcatcaatttact
ccgcaggagtatatggtgcttgagcagctgttgattcattgccgtcgcgtcactgtttca
ttgacggtggatgcgccttatgacgaacggctgccaaacgaattgcatctcttttattta
acggcaaaaacataccatgacattcgcgaaatagcgctgttaaatgggatttcgatcgaa
gatccggtagtgctagaaggaaatagacgccaccaagaaacagaactcgcccatcttgaa
gcgcattatcatgatcgccccgccgttgtctattcggaaaagaacgatgcgatttgcgtg
tatgaagcgtcaaaccgccgggcagaagtcgaggcgatcgcgcgggaaatcgttcacctt
gtccgcgacaaaggctactgctatcgtgatatcgccgtcatcgtccgcaatacggaagca
tatcgcgatttcattaaaacgattttttccgattttcatattccatattttatggacgaa
aaagagccgatgcgccatcatccgctcattgaattgttacgggcaagcatggaagttgtg
gcgtcgcggtggcgttatgaagcagtgttccgcgcgattaagaccgatttgctgtttccg
gttggcgaagatgtagccgcgctgcgcgaagcgatggacaagctggaaaattacgtgctc
gcgtacggcgtgaaaggggacaaatggacgaacggcgaacgttggacataccgtcgctat
caggcattagaagggttggcgattccgcagacggacgaagagaagcaatatgaagaaaag
ctgaatcaatggcgcgagatggtggcatctccgcttctacggctcgagcgccgcatgcgg
cgggcaaaagacggacgaggcctttgcgaagcggtttatctatttttagaagaattgcaa
attcctaaaaagctggagaacatgagcaaagaggcacaagagcagggaaaactcgtcgaa
gcaagacatcatgaacaagtatggaacgcggtgatcgatttgctcaaccagtacgtggaa
atgctaggggatgaaacgctccctgttacggagtttgcgaacattattgaaacgggtctc
gaccgtcttgaatttgcgcttgtcccgccggcaatggatcaagtgattatcgcgcagctg
gatcgctcgcgcctcatcgatatcaaatgtgcatttgtgatcggagtcaatgacggggtg
attccggccaaagcaaaagaagacgggttgatcgccgaggcggagcggcagctattgcac
gagctgggcgcgcgagtagctccgggcgggagagagcaattattttatgaaccttttttc
atctatttggcattaacgtgtccaagcgaacgcctatatgtcacttatccgcttgccaat
gaagaaggaaaagcactgccgccttcgatcgtcatcaagcatctggctgatttatttccg
tatttgcaaaagcgtgtatgcggaaacgatccgctcgatgcagcgcctgcggaacaagca
tcgtttgtgaccgcaccacgcgcgacgcaaacttatctcgtcgcacagcttcaggcatgg
aagcgcaattattccattgccccgctatggtgggatgtatacaactttttcatcagagac
tcaaattggagaaaacaggtgcaaaaagcaatctccgggctattttatacaaatgaaaca
gcgccgttgaaaaaagaaatcagcaagcggctgtatgggaaaaaaatccaagctagcgta
tcgcgcatggaacaatttcaaaaatgcccgttttcccattttgcttcccacggtttacgc
ctaaaggagcgaaccgtcttccggcttgaagctccggacatcggccagctgttccattct
gcgctgaaaatgatatccgaccgcctgcgcgaagcaaacaccgattggcgccatttatcc
aaacagcaatgcgagcggctgtccatcgaagcggtggagcaggtcgcaccactcattcag
caaaaggtattattcagctcgaatcgctactactatatgaagcggaaactgcaaaacgtc
atcgccagaacggcgcatgtgctaagcgagcacgcacgggcaagcggctttgtgccggtc
ggtttggagctggagttcggccctaacggcgtgcttccgccactatcgttccgtcttccc
gatggcaccgtgatggaactggtcggacgaattgaccgcgtcgataaagcggagagttca
agaggggttttattgcgcgtaattgactataaatctagcgccaaaacgctagatttaacg
gaagtatactatggtctcgccttgcagatgcttacgtacttggatattgtgctgacgtat
gccgaacagctggtcggccaagaagctttccctgccggcatcctttatttccatgtgcac
aatccgatgataaaaagcaatcaattcctgcaagatgaaaaagaaatcgagaaaaagctg
ctcgagcagtttaaaatgcgaggtctgctgctagaagacgcggaggccatccgcttgatg
gatatgcacatcgaagaaggcaaatggtcgctcgtcgttcccgcacaaattacaaaaaaa
ggtgcgattcattcgaaatcttctgttgtcagcgaaacagatttcgcctatctgcgccag
catattcgccagctgttccaaatgattggcatacaaattgtggacggggccgttgatatc
gctccgtacaagctaaaggaacaaactccttgcgaattctgcccgtttaagccagtttgc
cagtttgacgaatcattcctaggcaatcgttaccggctgttaacgccgcaggacaatcag
gcgatcatgaaaaaattatcggaagggaaggactga
DBGET
integrated database retrieval system
