Saccharococcus caldoxylosilyticus: BV455_01281
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Entry
BV455_01281 CDS
T07489
Symbol
yfhQ
Name
(GenBank) putative A/G-specific adenine glycosylase YfhQ
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pcal
Saccharococcus caldoxylosilyticus
Pathway
pcal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BV455_01281 (yfhQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcal03400
]
BV455_01281 (yfhQ)
Enzymes [BR:
pcal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
BV455_01281 (yfhQ)
DNA repair and recombination proteins [BR:
pcal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BV455_01281 (yfhQ)
Prokaryotic type
BV455_01281 (yfhQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
CHDNT
Motif
Other DBs
NCBI-ProteinID:
QXJ37993
LinkDB
All DBs
Position
complement(1227653..1228765)
Genome browser
AA seq
370 aa
AA seq
DB search
MKEQTLLGGFAIKQFQQDLIGWFEKEQRDLPWRKDNDPYKVWVSEVMLQQTKVDTVIPYF
QKFIEQFPTLEALAEADEEEVMKAWEGLGYYSRVRNLHAAVKEVKEQYGGKIPANREQFA
KLKGVGPYTTGAVLSIAYGIPEPAVDGNVMRVLSRIFLVWEDIAKTGTRKLFEAIVRQII
SRENPSYFNQALMELGALICTPRNPACLLCPVQAHCRAFAEGVQTELPVKTKKTNVKQVP
IIAAVLKDENGKVLIHKRGSEGLLANLWEFPNCEAADGQASPEERLEAFLKEQYGVQAQL
GQPFLALEHAFSHLIWDITVYDGKIAGKFTETEQLKLVGEKEIESYAFPVSHQRIWEEYK
QKTGGLFHPF
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaacaaacattgcttggcggatttgccatcaaacagtttcagcaagatttaatc
ggctggtttgaaaaagaacagcgcgacctgccgtggcgcaaagataacgacccgtataaa
gtatgggtgtcggaagtgatgcttcagcaaacaaaagtggatacggtcattccgtatttt
caaaagtttatcgagcagtttccgacgcttgaagcgcttgcggaagcggatgaagaagaa
gtgatgaaagcgtgggaagggctcggctattactcgcgcgtccgcaatttgcatgcggcg
gtaaaagaagtgaaagagcaatacggcggaaaaattcctgctaaccgcgaacaatttgcg
aaattaaaaggggtcggaccgtatacgaccggtgcggtgctaagcatcgcctacggcatt
cctgaaccggcggtcgacggcaatgtgatgcgggtattatcacggatttttcttgtctgg
gaagatattgccaaaacaggaacgagaaagctgtttgaagcgattgtccggcaaattatt
tcacgcgaaaacccttcgtattttaaccaggcgttgatggagttaggggcgcttatttgc
acaccgcgcaatcccgcctgcctgctctgcccggtgcaggcgcattgccgcgcgtttgcc
gaaggagtgcagacagagctgccggtcaaaaccaaaaaaacgaacgtgaaacaagtgccg
atcatcgctgcggtgttgaaggacgaaaatggaaaggtattgatccataagcgcggcagc
gaaggcctgctcgcgaacttatgggaatttccaaactgtgaagcggcggacggacaagcg
agtccagaagagcgtctggaagcatttttaaaggaacaatatggggtccaggcacagctt
ggccaaccgttccttgcactagagcatgcattttcccacttgatttgggatattacggtt
tatgacggaaaaatagccggcaaatttactgaaacggaacagctgaagctggtgggtgag
aaggagatcgaatcgtacgcgtttcccgtttcccatcagcgcatttgggaagagtataaa
cagaaaacaggcggattgttccacccgttttag
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