Saccharococcus caldoxylosilyticus: BV455_02602
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Entry
BV455_02602 CDS
T07489
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pcal
Saccharococcus caldoxylosilyticus
Pathway
pcal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BV455_02602 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcal03400
]
BV455_02602 (mutM)
Enzymes [BR:
pcal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BV455_02602 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BV455_02602 (mutM)
DNA repair and recombination proteins [BR:
pcal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BV455_02602 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QXJ39237
LinkDB
All DBs
Position
2528018..2528842
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AA seq
274 aa
AA seq
DB search
MPELPEVETIRRTLIPLTVGKTIEEVRVFWPKIVQYPADVTEFAETVKGQTIHDIERRGK
FLKFMLDKHVLISHLRMEGRYAVWRKGDPAEPHTHVIFRFTDGTELRYRDVRKFGTMHLY
PKGEEDGRPPLSQLGPEPFSETFTANFLAERLRKTNRTIKTVLLDQTVVVGFGNIYVDES
LFRAGIHPERIASSLTDEEVARLHREMVAILQEAIEKGGSTVRSYVNTQGESGMFQLQLF
VYGRKGEPCKRCGQPIQKTVVAGRGTHYCPCCQR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccggaagtagaaacgattcgccgcactcttattccgttaaccgttggc
aaaacgatcgaagaagtgcgggtgttttggccaaagatcgttcaatatccagccgatgtg
acggaatttgctgagacggtcaaaggacaaacgatccatgatattgaacggcgggggaaa
tttttaaaatttatgctcgataaacatgtgctcatttcccatttgcgaatggaaggacgc
tatgcggtttggcgcaagggtgaccctgccgaaccgcatacccatgttattttccgcttt
accgatggtacagaacttcgctatcgcgatgtaagaaagtttgggacgatgcatctttat
cctaaaggagaagaagatggccggccgcctttgtcccagttgggccctgaaccgttttct
gaaacatttactgcaaattttcttgcagaacggctgcgaaaaacgaaccgtaccatcaaa
acagtgcttcttgaccaaacggttgtcgttgggttcggtaatatttatgtagatgagtca
ttattccgtgcgggaattcaccctgaacgtatcgcgtcgtcgttaaccgatgaggaagtt
gcacgtttacatcgcgaaatggtggcaatattacaagaagcgatcgaaaaaggaggaagt
acggtaaggtcatacgtcaacacacaaggagaaagcggaatgtttcaactgcagttattc
gtgtacggacgaaaaggagaaccgtgcaaacgctgcgggcaaccgattcaaaaaacggtt
gtcgccggacgcggcacccattattgcccttgttgccaacgctga
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