Saccharococcus caldoxylosilyticus: BV455_03318
Help
Entry
BV455_03318 CDS
T07489
Symbol
cytR
Name
(GenBank) HTH-type transcriptional repressor CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pcal
Saccharococcus caldoxylosilyticus
Brite
KEGG Orthology (KO) [BR:
pcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcal03000
]
BV455_03318 (cytR)
Transcription factors [BR:
pcal03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BV455_03318 (cytR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_38
HTH_10
HTH_3
HTH_6
MerR
Motif
Other DBs
NCBI-ProteinID:
QXJ39945
LinkDB
All DBs
Position
3172179..3173186
Genome browser
AA seq
335 aa
AA seq
DB search
MVRIKDVAKLANVSTATVSRVLRNAGNVKEETRKRVLEAIEKLHYQPNVLGRNLRRMETE
TILVVVPDMTNPFFSKVLRGIESVAIQNGYRVLLGDTQNNVRLEEEYLNLLRQKQVDGTI
FLTARINKELMEEMSRQFPIVLACEYLEGATIPTVSIDNISSARKATEHLIKLGHRRIAH
LSGPMNIILSRDRLRGYQQAIMQYELDVDPVLIQEGDFSYESGYNLTLKLLALKNPPTAI
FAANDEMAIGAIKAIRKLSLRVPDDIAVVGFDDIKIASIFEPNLTTISQPMFEIGEKAMN
LLLQLMKGKKLDRRQFVLEDRLIVRDSCGGKGMEK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaatcaaagatgttgcaaaattagctaatgtatccacagcaacagtatcacgc
gttttacgcaatgcgggcaatgttaaggaagaaacgagaaagcgggtgctggaagccatc
gaaaagctccattatcagccaaatgttcttggaagaaatctgcgcagaatggaaaccgaa
acgatattggtggtagtgccggatatgacgaaccctttcttttcgaaagtattgaggggg
attgaatcggtcgccatccaaaatggataccgggtactattaggcgatacgcaaaataat
gttcgtctggaagaagaatacttaaatcttttgcgccaaaaacaagtagatggaacgatt
tttctaactgcccgtatcaacaaagagcttatggaagaaatgtcacggcaatttccgatt
gttcttgcttgtgagtatttagaaggggcaaccattcctaccgtttccattgataatatt
agcagcgcccgcaaggcgacagaacatttgattaaactagggcatcgtcgcatcgcccat
ctttccggcccgatgaatatcattttaagccgtgaccgtttgcgcggataccaacaagcg
ataatgcaatatgaattggatgtggatccggtacttattcaggaaggggatttttcatat
gaaagtggttataatttaacgctaaaactccttgcccttaaaaatccgccgacagccatt
tttgcggcgaatgacgagatggcgattggggcaatcaaggcgattcgaaaactttcattg
cgtgttccagacgatatagccgtcgttggctttgacgatattaaaattgcatcgattttc
gaaccaaatttgacgaccatttcccagccaatgtttgaaatcggggaaaaggcgatgaat
cttttactccagctaatgaaaggaaaaaagttggatagacggcagttcgtattagaggat
cggctgatcgtccgtgattcttgcggaggaaaaggaatggaaaaatga
DBGET
integrated database retrieval system
