Aquipseudomonas campi: HNE05_01040
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Entry
HNE05_01040 CDS
T07561
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pcam
Aquipseudomonas campi
Pathway
pcam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNE05_01040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcam03019
]
HNE05_01040
Enzymes [BR:
pcam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HNE05_01040
Messenger RNA biogenesis [BR:
pcam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HNE05_01040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
QKE62009
UniProt:
A0A6M8FDE5
LinkDB
All DBs
Position
760745..762067
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AA seq
440 aa
AA seq
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MTFAALGLIDPLLRALDSLDYRTPTPVQKEAIPAVLKGRDLLAAAQTGTGKTAGFALPLL
QTLTMQGGQVASNSVRALVLVPTRELAEQVHQSILQYGQNLPLRTYAVYGGVSINPQMMK
LRKGIDLLVATPGRLLDLYRQNAVKFNQLQALVLDEADRMLDLGFARELDEVFCALPKKR
QTLLFSATFSDAIRSMAKELLNDPLSVEVSPRNAAAQSVKQWLVTVDKKRKSELFLHLYR
SQRWDQVLVFVKTRKGVDELEKLLLAEDIAADSIHGDKPQPSRLRALQRFKDGEVRVLAA
TDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGATGQAVSLVCADEVQLLSAIE
VLIRQTLRRVDEPGFEPDHRVPQTDASGQVLKKPKKPKKPKVVGGKAGLGKWLESEEPAA
PVVKAVRKAPSFGGKAKKRP
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgccgccctcggcctgatcgaccccctgctgcgtgccctcgacagcctcgac
taccgcaccccgacaccggtgcagaaggaggcgatccctgccgtactcaagggccgcgat
ctgctcgccgcggcgcagaccggcaccggcaagaccgccggtttcgctctgccgttatta
caaacgctgaccatgcaaggcggtcaggtggcgagcaactcggtgcgcgctctggtgctg
gtgccgacccgcgagctggccgagcaggtgcaccagagcatcctgcagtacgggcagaac
ctgccgctgcgcacctatgcggtgtacggcggggtcagcatcaacccgcagatgatgaag
ctgcgcaagggcatcgacctgctggtggccacgcccggccggctgctcgacctgtaccgg
cagaacgcggtgaagttcaaccagctgcaagcgctggtgctggacgaggccgaccgcatg
ctcgacctgggcttcgcccgcgagctggatgaagtgttctgcgccctgccgaaaaagcgc
cagaccctgctgttctccgcgaccttctctgacgccatccgcagcatggccaaggagctg
ctgaacgacccgctgagcgtcgaggtcagtccgcgcaatgccgcggcgcagagcgtcaag
cagtggctggtgacggtggacaagaagcgcaagagtgaactgtttctgcacctctaccgc
agccagcgctgggatcaggtgctggtgttcgtgaagacgcgcaagggcgtcgacgagctg
gaaaaactgctgctggccgaagacatcgccgccgactcgattcacggtgacaagccgcag
ccgtcgcgcctgcgcgccctgcagcgcttcaaggacggcgaagtgcgggtgctggcggcc
accgatgtagcggcgcggggcctggatatcgacgacctgccgctggtggtcaacctcgac
ctgccgatcgtcgccgaggactacgtgcaccgcatcggtcgtaccggtcgcgccggcgct
actggccaggcggtgtcgctggtgtgtgccgacgaagtgcagctgctctcggccatcgaa
gtgctgatccgccagaccttgcgtcgggtcgacgagcccggcttcgagccggatcaccgg
gtgccgcagaccgacgccagcggccaggtgctgaagaagccgaaaaagccgaagaaaccc
aaggtggtgggcggcaaggccggcctgggtaagtggctggagagcgaagaaccggccgcg
ccggtggtcaaggcggtgcgcaaggcaccgagctttggcggcaaggcgaagaagagaccc
tga
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