Aquipseudomonas campi: HNE05_03310
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Entry
HNE05_03310 CDS
T07561
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pcam
Aquipseudomonas campi
Pathway
pcam03030
DNA replication
pcam03430
Mismatch repair
pcam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HNE05_03310 (dnaE)
03430 Mismatch repair
HNE05_03310 (dnaE)
03440 Homologous recombination
HNE05_03310 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcam03032
]
HNE05_03310 (dnaE)
03400 DNA repair and recombination proteins [BR:
pcam03400
]
HNE05_03310 (dnaE)
Enzymes [BR:
pcam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HNE05_03310 (dnaE)
DNA replication proteins [BR:
pcam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HNE05_03310 (dnaE)
DNA repair and recombination proteins [BR:
pcam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HNE05_03310 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QKE62425
UniProt:
A0A6M8FZ12
LinkDB
All DBs
Position
1259886..1263404
Genome browser
AA seq
1172 aa
AA seq
DB search
MTTTFVHLRLHTEFSLVDGLVRVKPLVKAVAGAGMPAVAVTDQSNMCSLVKFYKAAQGGG
IKPICGADIWLASAEEDGPLTRMTLLAMNAKGYRNLTELVSRGWSDGQSNDLVIIQRDWV
KEAAEGLIALSGARDGEIGHALLAGEQARAEALLGEWQAVFPERFYLELHRCNRINDEEH
VHAAVALAARCGAALVATNDVRFLKQGDFEAHETRVCIGESRTLDDPRRPRTYSDQQYLK
TPAEMAELFSDIPEALENTVEIAKRCNIEVQLGKYFLPDFPVPDGMTIDEYFRKVSFDGL
DERLEVLLPKDTPDYEAKKQVYIDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPVG
PGRGSGAGSLVAYVQKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYVA
EKYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEMEE
PLRDFLKVDEEAAEIWEMSLKLEGICRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLVT
QFDKDDVEAAGLVKFDFLGLRTLTIIKWAMETINREQAKKGLPDVNIDFIPLDDKKTYDM
LQKAETTAVFQLESRGMKELIKKLKPDCLEDMIALVALFRPGPLQSGMVDDFINRKHGRE
QLSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPEE
MAKQRGGFIEGCASNNISADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHFP
SPFMAAVLSADMHNTEKVVTLIEECRSMKLRILAPDVNNSEFKFTVDDDGRIVYGLGAIK
GVGEGPVEAIVESRQDGPFKDLFDFCSRVDLKRINKRTLEALIRGGALDRLGPYFDDELK
AYQAGIDRNRAVLLAAMEEAAQAAEQAARSHDSGHADLFGGLFSEPEADVYVNHRNAREL
SLKERLKGEKDCLGLYLTGHPIDEYEGEVRRFARQRIIDLRPARESQTIAGLIVNLRVMK
NKKGDKMGFITLDDRSGRIEASLFADAFASNQALLQSDALVVVEGEVSNDDFSGGLRLRA
KRVMSLEEARTGLAESLRLCVGREALQGDRLRWLGELLGKYRGACPLTLDYSGSDAKAVL
QFGEQWRIDPADGLIQSLRDQFGKDNVFLQYR
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccttcgtccatctacgcctgcataccgagttttccctggtcgatggcctg
gtccgggtcaaacccctggtcaaggcggtggccggtgccggcatgccggcggtggcggtc
accgatcagagcaacatgtgctcgctggtgaagttctacaaggcggcgcagggcggcggg
atcaaaccgatctgtggtgccgacatctggctggccagcgccgaagaagacggcccgttg
acgcgcatgaccctgctggcgatgaatgccaagggctatcgcaatctcaccgaactggtc
tcgcgcggctggagcgatgggcagagcaacgacctggtgatcatccagcgcgactgggtc
aaggaagcagccgagggcctgatcgccctgtccggtgcgcgcgacggcgagatcggtcat
gccttgctggccggcgagcaggcgcgtgccgaggcactgctgggcgaatggcaggcggta
ttccccgagcgtttctacctcgaactgcaccgctgcaatcgcatcaacgacgaagagcat
gtgcatgccgccgtggccctggccgctcgctgcggtgcggcgctggtggcgaccaacgat
gtgcgcttcctcaagcagggcgacttcgaggcccacgagacccgcgtgtgcatcggcgag
agccgcaccctggatgacccgcgccgcccgcgcacctattccgaccagcagtacctgaag
actccggccgagatggccgagctgttcagcgacatccccgaggcgctggaaaacaccgtc
gaaatcgctaagcgctgcaacatcgaagtgcagttgggtaagtacttcttgcctgacttc
ccggtgccggatggcatgaccatcgacgagtacttccgcaaggtctccttcgatggcctc
gacgagcgcctggaagtgctgctgcccaaggacaccccggactacgaggcgaagaagcag
gtctacatcgaccggctgaatttcgagctggatatcatcatccagatgggtttccccggt
tacttcctgatcgttatggacttcatccagtgggccaagagcaacggcgtgccggtcggc
ccgggccgcggttcgggtgccggctcgctggtggcctatgtgcagaagatcaccgacctc
gacccgctggcctacgacctgctgttcgagcgcttcctcaaccccgaacgcgtctccatg
cccgacttcgacgtcgacttctgcatggacggccgcgaccgggtgatcgactacgtggcc
gagaaatacgggcgtaacgcggtgagccagatcatcaccttcggcaccatggcggccaag
gctgtggtgcgcgacgtggcgcgggtgcagggcaagtcctacggtctggccgatcgcctg
tcgaagatgattcccttcgaggtcggcatgaccctggagaaggcctacgagatggaggag
ccgctgcgcgacttcctcaaggtcgacgaggaggccgcagagatctgggagatgtcgctc
aagctcgagggcatctgccgcggtaccggcaagcacgccgggggcgtggtgatcgcgccg
accaagctcaccgacttctcgccgattgcctgcgatgaagagggtggcggcctggtcacc
cagttcgacaaggacgacgtggaggcggccggcctggtcaagttcgacttcctcggcctg
cgcaccctgaccatcatcaagtgggcgatggagacgatcaaccgcgagcaggcgaagaag
ggcctgccggatgtgaacatcgacttcatcccgctggatgacaaaaaaacctacgacatg
ctgcagaaggccgagaccactgcggtgttccagcttgaatcgcgcggcatgaaggagctg
atcaagaagctcaagccggactgcctggaagacatgatcgccctggtggcgctgttccgt
cccggtccgctgcagtcgggcatggtggacgacttcatcaaccgtaaacacggtcgcgag
cagctctcctacccgcatccggactaccagtacgcgggcctggagccggtgctcaagccg
acctacggcatcatcctgtaccaggaacaggtgatgcagattgctcaggtcatggccggc
tacaccctcggcggtgcggacatgctgcgtcgcgccatgggtaagaagaagcccgaggag
atggccaagcagcgcggcggtttcatcgagggttgtgccagtaacaacatctcggcggac
ctggcgggcaacatcttcgacctggtggaaaagttcgccggctacggcttcaacaaatcc
cactcggccgcctatggcctggtctcctaccagaccgcctggctcaaggcgcatttcccg
tcgccgttcatggccgcggtgctctcggcggatatgcacaacaccgagaaggtcgtgacc
ctgatcgaggagtgccgcagcatgaagctgcgcatcctcgccccggatgtgaacaactcc
gagttcaagttcaccgtcgatgatgacgggcgcattgtctacggcctgggtgcaatcaag
ggcgtgggcgaggggccggtggaggccatcgtcgagtcgcgtcaggatggcccgttcaag
gacctgttcgacttctgctcgcgggtcgacctcaaacgcatcaacaaacgcaccctggaa
gcgctgatccgcggcggcgcgctggatcgcctggggccttacttcgatgacgaactcaag
gcctaccaggccggcatcgaccgcaatcgtgcggtgttgctggcagccatggaggaggcg
gcgcaggctgctgagcaggcggcgcgcagccatgacagcgggcatgccgacctgtttggc
ggcttgttctccgagcccgaggcggatgtctacgtcaaccaccgcaacgcccgcgagctg
tcgctgaaagagcgcctgaagggcgagaaggactgcctcggcctgtacctcaccggtcac
ccgatcgacgaatacgaaggtgaagtgcggcgcttcgcccgtcagcgcatcatcgacctg
cgtccggcgcgcgagagccagaccattgctggtctgatcgtcaacctgcgggtgatgaag
aacaagaagggcgacaagatgggcttcatcaccctcgacgaccgttccgggcggatcgag
gcctcgctgttcgccgatgctttcgccagcaaccaggcgctgctgcagagcgatgcgctg
gtggtggtcgagggcgaggtgagcaacgacgacttctccggcggcctgcgcctacgcgcc
aaacgagtaatgagcctggaagaggcgcgtaccggcctggcggaaagcctacgcctgtgt
gtcgggcgtgaggcgctgcagggtgatcgtctgcgctggttgggtgagttgctcggcaag
taccgcggcgcctgcccgctgaccctggattacagtggcagcgacgccaaggccgtgttg
cagtttggtgagcagtggcgcatcgatccggccgatggtctgatccaaagcctgcgtgac
cagttcggcaaagacaacgtcttcctccaataccgctga
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