Aquipseudomonas campi: HNE05_11110
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Entry
HNE05_11110 CDS
T07561
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pcam
Aquipseudomonas campi
Pathway
pcam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HNE05_11110 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcam03400
]
HNE05_11110 (ung)
Enzymes [BR:
pcam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HNE05_11110 (ung)
DNA repair and recombination proteins [BR:
pcam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HNE05_11110 (ung)
Prokaryotic type
HNE05_11110 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QKE63874
UniProt:
A0A6M8F5L9
LinkDB
All DBs
Position
complement(2897846..2898538)
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AA seq
230 aa
AA seq
DB search
MSVDDRIKLEPGWKEALREEFDKPYMAQLSEFLRAEKAAGKVVFPPGPLIFNALNSTPLD
QVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIFKELQRDLNIDIPKHGCLQSWA
EQGVLLLNTSLTVEQANAGSHADKGWQPFTDKVIEVVNARPGNLVFLLWGAHAQGKQKLI
DATRHLVLKSAHPSPLSAYRGFLGNGHFSRTNKYLEQCGLTPIDWRLPAL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgacgatcgcatcaaactcgaaccgggctggaaagaggcccttcgtgaggag
ttcgacaagccctacatggcgcagctcagcgagtttctgcgggcggagaaggcggcgggc
aaggtggtgtttccgccggggccgctgatcttcaatgcgctgaattccacgccgctggat
caggtcaaggtagtgatcctcggccaggacccgtaccacggtcccggccaggcccacggt
ctgtgcttctcggtgcagcctggggtgccggcgccgccgtcgctggtgaatatcttcaag
gaattgcagcgcgacctgaatatcgacatccccaagcatggctgcctgcagagctgggcc
gagcagggcgtgctgctgctcaacacttcgctgacggtggagcaggccaatgccggctcg
catgccgacaagggttggcagccgttcaccgacaaggtgatcgaggtggtcaatgcgcgg
ccgggcaacctggtgttcctgctctggggcgcgcatgcccagggcaagcagaagctgatc
gatgccacccgccacctggtgctgaagtcggcccatccgtcaccgctgtcggcttaccgc
ggcttcctcggcaatggccacttcagccgcaccaacaagtacctggagcagtgcggcctc
actccgatcgattggcgactgccggcgctgtag
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integrated database retrieval system
