Aquipseudomonas campi: HNE05_11235
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Entry
HNE05_11235 CDS
T07561
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pcam
Aquipseudomonas campi
Pathway
pcam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNE05_11235 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcam03019
]
HNE05_11235 (recQ)
03400 DNA repair and recombination proteins [BR:
pcam03400
]
HNE05_11235 (recQ)
Enzymes [BR:
pcam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HNE05_11235 (recQ)
Messenger RNA biogenesis [BR:
pcam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HNE05_11235 (recQ)
DNA repair and recombination proteins [BR:
pcam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HNE05_11235 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QKE63897
UniProt:
A0A6M8FGJ0
LinkDB
All DBs
Position
complement(2933210..2935351)
Genome browser
AA seq
713 aa
AA seq
DB search
MLDQAPHPTALGILKDVFGYDAFRGKQAAIIERVAAGGDALVLMPTGGGKSLCFQVPGLL
REGLAVVVSPLIALMEDQVSTLDELGVAAVALNSTLSNDEQRDIAERIRRGEIKFLYVAP
ERLVQPRMLAFLQGLQIGLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTAT
ADMRTREEIVQRLHLENAERFLSSFDRPNIFYRILPKDQPRKQLLAFLTARKGDAGIVYC
LSRKKVEEVAEFLSGQGYPALPYHAGLPNELRAYNQKRFLNEEGLIMVATIAFGMGIDKP
NVRFVAHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLSNSEGDERHKR
VEQHKLDAMLALCEETRCRRQALLAYFDEELPQPCGHCDNCIDGVQTWDATEPARQALSA
IYRSGQRYGVGHLVDILLGRENDKIRAPGHQHLTVFGMGKALNEGEWRTLFRQLVARGLA
DVDLDGYGGLRLSDTCRPLLRGEVSLQLRRDLKPQQAAKASGSSASQLVRAEEREQWEAL
RSLRRKLAEEHSVPPYVIFPDSTLLEMLRSKPASLSDMAQVSGVGARKLERYGEAFLEVL
NGAAEAPQVVVDLRHELVSLARAGMTPLQIAAQLKCTEKNVYSLLAEAIGRQQLSLEQAL
DLPDDLLGAIQDAFLDGEGELPPVAAIAEQFAGQVPEGVLYCVRAALQAEFEV
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcaggcaccacatcccaccgcgctgggcatcctcaaagacgttttcggctac
gacgccttccgcggcaagcaggcggcgatcatcgagcgcgtggcggcgggcggcgacgca
ctggtgctgatgcctaccggtggcggcaagtcgctgtgcttccaggtgccgggattgctg
cgcgaaggcctggcggtggtggtatcgccgctgattgcgctgatggaagatcaggtctcc
accctcgacgagctaggcgtggccgccgtggcgctgaattccaccctgagcaacgatgag
cagcgcgatattgccgagcgcatccgtcgcggtgagatcaagttcctttatgtggccccc
gagcgcctggttcagccgcgtatgctggcttttctgcagggcctgcagattggcctgttc
gccatcgacgaggcgcattgcgtgtcgcagtggggccacgacttccgcccggaatacctg
cagctgggccagctcgccgagctgttcccccatgtgccgcgcatcgccctgaccgccacg
gcggacatgcgtacccgcgaggagatcgttcagcgcctgcatctggagaacgccgagcgg
ttcctctccagcttcgatcgcccgaacatcttctaccgcatcctgcccaaggatcagccg
cgcaagcagttgctggcctttctcacggcgcgcaagggcgatgccggcatcgtctattgc
ctgtcgcgcaagaaggtcgaggaagtcgccgagtttctcagtggccagggctacccggcg
ctgccgtatcacgccggcctgcccaacgaattgcgtgcctacaaccagaaacgcttcctc
aacgaggaagggctgatcatggtggcgaccatcgcctttggcatgggtatcgacaaaccc
aacgtgcgtttcgtggcccacctcgacctgcccaagtcgctggaggcctattaccaggaa
actggtcgcgccggccgtgacggcctgccggccgatgcctggatggcctacggcctgcag
gacgtgatcttcctcaagcagatgctcagcaactccgagggtgacgagcggcacaagcgc
gtcgagcagcacaagctggatgccatgctcgccctctgcgaggaaacccgctgccgccgt
caggcgctgctggcctacttcgacgaagagctgccgcagccctgcgggcactgtgacaac
tgcatcgacggcgtacagacctgggatgccaccgagccggcacgccaggcgctgtcggcc
atctaccgcagcggtcagcgttatggcgtcggtcacctggtcgacatcctcctcggccgc
gaaaacgacaagattcgcgcccctggtcatcagcacctgacggtgttcggcatgggcaag
gcgctcaacgaaggcgagtggcgcaccctgttccgccagctggtggcccgtggcctggcc
gatgtcgacctggacggctacggcggtctgcgcctgtccgatacctgccgtccgttgctg
cgcggtgaagtcagcctgcaattgcgccgcgatctcaagccgcaacaggcggccaaggct
tccggcagcagcgccagccagctggtgcgtgccgaggaacgcgagcagtgggaagccctg
cgcagcctgcgtcgcaagctggccgaagagcacagcgtgccgccttacgtgattttcccc
gattccaccctgctggagatgctgcgcagcaaaccggcctcgctgagcgacatggcgcag
gtcagcggcgtcggcgcgcgcaagctggagcgctacggcgaggctttcctcgaagtactc
aatggcgccgcagaagcgccgcaggtggtggtcgacctgcgccacgagctggtcagcctg
gcgcgtgccgggatgaccccgctgcagatcgccgcccagctcaaatgcaccgagaagaac
gtctacagcctgttggccgaagccatcggccgccagcaactgagcctggagcaggcgctg
gatctaccggacgatctgctcggcgcaattcaggatgcttttctcgatggcgaaggcgag
ctgccgccggttgcggccatcgccgaacagtttgccggacaggtgccggaaggcgtgctg
tactgtgtgcgggcggccctgcaggcggagttcgaggtctag
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