Aquipseudomonas campi: HNE05_11575
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Entry
HNE05_11575 CDS
T07561
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pcam
Aquipseudomonas campi
Brite
KEGG Orthology (KO) [BR:
pcam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcam03021
]
HNE05_11575 (rapA)
Transcription machinery [BR:
pcam03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HNE05_11575 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QKE63964
UniProt:
A0A6M8F5U9
LinkDB
All DBs
Position
3012844..3015705
Genome browser
AA seq
953 aa
AA seq
DB search
MASSGTVQQYEPGQRWISDSEAELGLGTILTSDGRLLTVLYPATGETRQYALRNAPLTRV
RFAPGDEITHFEGWKMTVQEVEDVDGLLVYHGFDAQHAPYTLPETQLSNFIQFRLASDRL
FAGQIDPLSWFSLRYHSLEHQSRLLQSNLWGLGGARAQPIAHQLHIAREVADRVAPRVLL
ADEVGLGKTIEAGLVIHRQLLTGRASRVLILVPENLQHQWLVEMRRRFNLEVALFDAERF
VESDADNPFEDTQLALVSLEWLKRSEKAQDAAFAAGWDLLVVDEAHHLVWHPEKASDEYR
LVEQLAGLIPGVLLLTATPEQLGLESHFARLRLLDPNRFHDLAAFRAESANYRPVAEAVQ
ELLDEGRLSEKAHATIHGFLGAEGEALLAAVSDGDTEAAARLIRELLDRHGTGRLLFRNT
RAAVQGFPQRELHAYPLANPVEYMELPLGEHADLYPEVSYQAQQEGAEDERWWKFDPRVD
WLIDTLKMLKKFKVLVICAHAETAMDLADALRVRSGIPATVFHEGMNILERDRAAAYFAD
EEFGAQVLICSEIGSEGRNFQFSHHLALFDLPAHPDLLEQRIGRLDRIGQKHVIQLHVPY
LENSPQERLFQWYHQALNAFLNTCPTGNALQHQFGPRLLPLLEESDGGDWQGLLDDATAE
RKRLEGELHSGRDRLLELNSGGSGEGQQLVEDILEQDDQFALPIYMEELFDAYGIDSEDH
SENALVLRPSEKMLDASFPLGDDEAVTVTYDRNQALAREDMQFLTWEHPMVQGGMDLVLS
GSMGNTAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLSRYLPPVALRCLLDGNGNDLA
ARVAFETLNDQLESVPRASANKFVQAQREVLSKQINAAEAKILPRHTQRVDEARQRFSAG
LDEEIARLTALQAVNPSVRDSEIEALRKQRSSGLSFFEKAAMRLEAIRVLVAG
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtagtggcactgtgcagcagtatgaaccggggcaacgctggatcagcgacagc
gaggcggaactgggcctcggcaccatcctgacctccgacggccgcttgctgaccgtactc
tatccggcgaccggcgaaacccgccagtacgccctgcgcaacgccccgctgacccgcgtg
cgcttcgccccgggtgacgagatcacccacttcgaaggctggaagatgaccgtgcaggaa
gtcgaagacgtcgacggcctgctggtctaccacggtttcgatgcccagcacgcgccctac
accctgccggaaacccagctgtccaacttcatccagttccgcctggccagcgaccgcctg
ttcgccggacagatcgacccgctgagctggttctccctgcgctaccacagcctcgaacac
cagagccgcctgctccagtccaacctgtggggcctgggtggcgcgcgcgcgcagccgatc
gcccaccagctgcatatcgcccgcgaagtggccgaccgggtcgccccgcgcgtgctgctg
gccgacgaagtgggcctgggcaagaccatcgaagccggcctggtgatccaccgccagctg
ctcactggccgtgccagccgcgtgctgatcctggtgccggagaacctgcagcaccagtgg
ctggtggaaatgcgccggcgcttcaacctggaagtggcgctgttcgacgccgaacgcttc
gtcgaaagcgatgccgacaaccccttcgaggacacccagctggcgctggtctcgctggaa
tggctgaagcgcagcgagaaagcccaggacgccgcgttcgccgccggctgggacctgctg
gtggtcgacgaggcccaccacctggtttggcacccggaaaaggccagcgacgaataccgc
ctggtcgagcaactggccggcctgattcccggcgtgctgctactcactgccaccccggaa
cagctgggactggaaagccacttcgcccgcctgcgcctgctcgaccccaaccgtttccat
gacctcgccgccttccgcgccgaaagcgccaactaccgcccggtcgccgaagcggtacag
gaactgctcgacgaaggccgcctgtcggagaaggcccacgccaccatccacggcttcctc
ggcgccgaaggcgaagcgctgctggccgcggtcagcgatggcgataccgaggccgcggca
cggctgatccgcgagctgctcgaccgccacggcaccggccgcctgctgttccgcaatacc
cgcgccgccgtgcagggtttcccccagcgcgagctgcacgcctacccgctggccaatccg
gtcgagtacatggagctgccgctcggcgagcatgccgacctgtacccggaagtcagctac
caggcccagcaggaaggcgccgaggacgaacgctggtggaagttcgacccgcgcgtcgac
tggctgatcgacaccctgaagatgctcaagaagttcaaggtgctggtgatctgcgcccac
gccgagaccgctatggatctcgcagacgccctgcgcgtgcgctccggcatcccggccacg
gtgttccacgagggcatgaacatccttgagcgcgaccgcgccgccgcctacttcgccgac
gaggaattcggcgcccaggtgctgatctgttccgagatcggttccgaaggccgcaacttc
cagttcagccaccacctggcgctgttcgacctgccggcccacccggacctgctcgaacag
cgcatcggccgcctcgaccggatcggccagaagcatgtgatccagctgcacgtgccgtac
ctggagaacagcccgcaggagcgcctgttccagtggtatcaccaggcgctgaacgccttc
ctcaatacctgcccgaccggcaacgccctgcagcaccagttcggcccgcgcctgctgcca
ctgctggaagaaagcgacggcggcgactggcaaggcctgctggacgacgccacggccgag
cgcaaacgcctggagggcgagctgcacagcggccgcgaccgcctgctggaactcaattcc
ggtggctccggcgaaggccagcagctggtcgaggacattctcgaacaggacgaccagttc
gccctgccgatctatatggaagagctgttcgacgcctacggcatcgacagcgaagaccat
tcggaaaatgccctggtgctgcgccccagcgaaaagatgctggacgccagcttcccgctt
ggcgacgacgaggcggtcaccgtcacctacgaccgcaaccaggccctggcccgcgaagac
atgcagttcctcacctgggaacaccccatggtgcagggcggcatggacctggtgctgtcc
ggttcgatgggcaacaccgcggtggcgctgatcaagaacaaggcgctgaaacccggcacc
gtgctgctcgaactgctctacgtcagcgaagtggtggcgccgcgctcgctgcagctaagc
cgctacctgccgccggtagcgctgcgctgcctgctcgacggcaacggtaacgacctggcc
gcacgtgtggccttcgaaaccctcaacgaccagctggaaagcgtgccacgggccagtgcc
aacaagttcgtgcaggcccagcgcgaagtgctgagcaagcagatcaacgccgccgaggcg
aagatcctgccgcgccacacccagcgcgtggatgaagcgcgccagcgcttcagcgccggc
ctggacgaggaaatcgcccgcctgaccgccctgcaagcagtcaacccgagcgtgcgcgac
agcgagatcgaggccctgcgcaagcagcgcagcagcggtttgagcttcttcgagaaagcc
gccatgcgcctggaggcgatccgcgtactggtcgccggctga
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