Aquipseudomonas campi: HNE05_14220
Help
Entry
HNE05_14220 CDS
T07561
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcam
Aquipseudomonas campi
Brite
KEGG Orthology (KO) [BR:
pcam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcam03016
]
HNE05_14220 (truB)
Enzymes [BR:
pcam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HNE05_14220 (truB)
Transfer RNA biogenesis [BR:
pcam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HNE05_14220 (truB)
Prokaryotic type
HNE05_14220 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
TruB_C
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QKE64456
UniProt:
A0A6M8FX16
LinkDB
All DBs
Position
complement(3578189..3579106)
Genome browser
AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPHGFSSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYETLAQLGVTTTTGDAEGDVLERREVTVGRDDVEVLLPRFRGEIS
QIPPMYSALKKDGQPLYKLARAGEVVEREARSVTIARLELLSLEQSHLRLSVACSKGTYI
RTLVEDIGQLLGCGAHVAELRRTQAGPFSLAQTVTLEELERAHAEGGNEAVDRFLLPSDS
GLQHWPLLQFSEHSAYYWLHGQPVRAPEAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgccgcaatgtcagtggcatcatcctgctcgacaagccg
cacggcttcagctccaacgccgcgctgcaaaaggtgcgctggctgctgaatgccgagaag
gccggccacaccggcagcctcgacccgttggccaccggcgtgctgccgctgtgtttcggt
gaggcgaccaagttctcccagtatcttctggatgccgacaagggttacgagaccctggcc
cagctcggcgtgaccaccaccaccggcgatgccgagggtgatgtgttggagcgccgtgag
gtgaccgtcggtcgggacgatgtggaagtgctgctgccgcgttttcgcggtgaaatcagc
cagataccaccgatgtactcggccctgaagaaggatggccagccgttgtacaagctggcg
cgagccggtgaagtagtggagcgtgaggcgcgttctgttactattgcgcgcctggaatta
ctcagcctcgaacagtcgcacctgcgcttgagcgtggcctgcagcaaaggcacctatatt
cgtaccctggtcgaggatatcggccagttgctcggttgcggtgctcatgttgccgaattg
cggcgtactcaggccggtccgttcagcctggcgcagacggtaaccctggaagagctggaa
cgggcccatgccgaaggtggcaacgaggccgtggaccgcttcctgctgccgtccgatagt
ggcctgcaacactggccactgctgcagttcagcgagcacagcgcctactactggctgcat
gggcagccggtacgcgcaccggaagcgccgaagttcggcatggtgcgggtgcaagatcac
aatggccgcttcatcggtatcggtgaagtgagcgaagacgggcgcattgcgccgcgtcga
ctgattcggtcggaatga
DBGET
integrated database retrieval system
