Pomacea canaliculata (golden apple snail): 112553296
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Entry
112553296 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112553296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcan03041
]
112553296
Spliceosome [BR:
pcan03041
]
Complex B
Other components
Prp19-related factors
112553296
Complex C
112553296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
RRM_occluded
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_YTH1
zf-CCCH_2
zf-CCCH
zf-CCCH_4
RRM_3
zf-CCCH_10
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
112553296
NCBI-ProteinID:
XP_025076196
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All DBs
Position
LG1:2262491..2270136
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AA seq
431 aa
AA seq
DB search
MAMSKSANTYNRQNWEDSEFPILCQTCLGDNPYIRMTKEKYGKECKTCGRPFTVFRWCPG
ARMRFKKTEVCQTCSKVKNVCQTCLLDLEYGLPVQVRDSALKLQESMPKSDVNKEYYTQN
MEREIANTDGISPVGALTGKAQTPSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEEC
PYRHEKPTDPDDPLADQNIKDRFHGINDPVAEKLLGRYNSMPKLEPPEDKTVTTLYVGNL
GDKVGEKEIRDHFYQFGEIRSINIVIKQQCAFVQFTSRSSAEAAADKSFNKLIINGRRLN
IKWGRSQAQQSMVRKDNMEGDLPLEPVPGLPGALPMPPEELANNFFNLGGGPSPAMPPRG
MSPRGPPPMHPFGMPIRGPFPPGMHLPPPPPGVMPMRPPPGMPPRPSGPAPVHYPSQDPT
RMGAVASASKS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtccaaaagtgcgaatacttataacagacaaaattgggaagactctgagttt
cccattttgtgccagacatgtcttggggacaacccttacatccgaatgacaaaggaaaaa
tatggcaaggagtgcaagacatgcggccgacccttcacagtgttccgttggtgtcctggg
gcccgaatgcgattcaagaaaactgaggtgtgtcagacttgcagcaaagtgaaaaacgtc
tgccagacctgcctcttagatctagaatatggtttacctgtccaagtgcgtgactcagcc
ttgaagctacaagaaagcatgccgaagtctgatgttaataaagaatactacactcaaaac
atggagagagagattgccaatactgatggaatttcgcctgtaggagctctgacaggcaaa
gcacaaacacctagtgacatgctgttgaaactggccagaacaactccctattacaaacga
aatcggcctcacatttgttctttttgggtaaaaggtgaatgcaaaagaggcgaggagtgt
ccgtatagacacgaaaaaccaactgatcctgacgatccattggccgatcagaacattaaa
gacaggttccatggcatcaatgatccagtagcagagaagcttctaggtcgctacaattcc
atgccaaagctggagccaccagaagataaaacagttaccactctatatgttggcaacctt
ggcgacaaagttggggaaaaagaaatcagagaccatttctaccagtttggggaaattcga
tccatcaacatagtgattaaacagcagtgtgcatttgtacaattcacatctcgctcatct
gctgaggcagccgctgacaagtcttttaataagctgatcataaatggacgtcggcttaat
atcaagtgggggcgatcgcaagcacaacagtccatggttcggaaagataatatggaaggc
gatcttcctttggagccagttcctggtcttccaggagctctaccaatgcctcccgaagag
ttggcaaataatttcttcaatcttgggggaggtccttcaccagctatgcctcctcggggc
atgtctccacgaggtcccccacccatgcacccgtttggcatgcctatacgtggaccattt
ccaccaggtatgcacctcccaccaccaccacctggtgtaatgcccatgcgacctccacct
ggaatgccacctcgaccatctggacctgcccctgttcactatccttctcaggatccaacc
agaatgggcgctgttgcctcagcctccaaaagttaa
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