Pomacea canaliculata (golden apple snail): 112554363
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Entry
112554363 CDS
T05881
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like
KO
K15542
polyadenylation factor subunit 2
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112554363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112554363
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112554363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_ELP1_1st
Beta-prop_WDR11_2nd
Beta-prop_SPT8
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
112554363
NCBI-ProteinID:
XP_025077904
LinkDB
All DBs
Position
LG2:complement(28603535..28623506)
Genome browser
AA seq
1041 aa
AA seq
DB search
MEGGTLIAKNPTMPSMHQTAATQRMPPKMFKDTAVPDMRMGNLRDRGPANVLPAGIANAA
QFDGKRMRKAIHRKTIDYNPTIIRYLEDRVFQRDYRDRPAIQPDSLYACQLLPPSALLDK
PMNCVTTKFVRTSTNKFRCPIFCLTWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHD
SSVRAMRWSHNDLWMVTADHAGYIKYWQSNMNNVKMYQGHKEAIRGISFAPTDSKFATCS
DDGTVRIWDFMRCHEEKILRGHGADVKCVDWHPQKSLVASGSKDNQQPIKLWDPRTGNSL
ATLHAHKHTVMDLSWNQNGQWLLTASRDHLLKLFDIRNLKTELQTFKGHKKEATSIAWHP
IHESLFATGGSDGSLMFWLVGCDREVGSMEEAHDGMVWSLGWHPLGHILVSGSNDHSTKF
WTRNRPGDEMRDRYNLNNLPAGVEQELLEYNQEPQLMPNLPGMGLEHGLPDHLQSKEESE
YEELPNIPGLDWNMDSPFFKQLDLNKLPQKKIPFAKPIPKSFEQAWLGNKPMVPVANAPK
EEKKGPHMQQQQQKPSRSDGNKGSNGGIPGLPGVTPEALSILLGVNPGSIPPAALMGMLS
SAGNLMQLQQSGILAIQQQALLLQQQAAMSQQALQQQQNASGQAPQGLQQQHKPGENNPQ
LQSQLGQQQQQIPGALKQPILGPMQQQGMPLRPPMPSPQQLQPPQMQLPNMQPMSMRPMI
NQFRPPMPGQGQQQQLPAEGIKQAGQMGSQNQFRPPGPGQFGPSCQQFKPKPQQMGGQPS
PGNQSIMDQDLRRPAGPTTPSSTPQQPSSTLDMDFRRQGTPGTPEQFGSEGDLDLRHTGG
RGMGAGRFPPQGRGGRGGGSSSVPNKQGAQYHDSDMRLQQQYYGGERGMSGGGGGGYADD
GYGDHYMEEQYGDFDARGGGGGGGGGRDKDDRYMQGSGGSADGGYSMHSDMYGNAGYKGS
YQDRQGAGPARDRNHFEEEQQVGRKRQWEEGPGLGARGRPQDPRVPGGHGGARRGMVYNG
PAGPLEGRRGGRGRGGYRGGW
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggagggagggacattaatagcaaagaatcctacgatgccttccatgcatcagacagca
gctacccagcgcatgccaccaaaaatgtttaaagacactgctgtacctgatatgcgaatg
ggaaatttaagagatcgagggccagcaaatgttttacctgcaggcattgcaaatgcagca
caatttgatggaaaacgcatgcgaaaggcaatacaccgcaagacaattgactataacccc
accataataaggtacctggaggatcgtgtatttcaaagggattacagagacagacctgct
atacagcctgattccctgtatgcgtgtcagcttttgccaccatctgctcttttggacaag
ccaatgaactgtgttactaccaagtttgtacgaacttccaccaataagtttcgctgtcct
atcttttgtctcacatggacaccagaaggtcgtcgactggttactggagcttccagtggt
gaatttactttatggaatgggctgacttttaactttgaaacaattctacaggcgcatgat
tcttctgtgagagcaatgcgttggagccacaatgacctctggatggtgactgcagaccat
gctggctacatcaaatactggcagagcaacatgaacaatgtcaagatgtaccagggacac
aaggaggctatccgtggcatcagttttgcccccacagacagtaaatttgctacatgttca
gatgatggtacagtcagaatatgggacttcatgaggtgtcacgaagaaaaaatacttcga
ggtcatggtgctgatgtcaagtgtgttgactggcacccccagaagtctcttgtagcttca
ggcagcaaagataaccaacagccaatcaaactatgggatcctcgcactggcaacagtctt
gccacactccatgctcacaagcacacagtaatggatctgagttggaaccagaatgggcag
tggctgttgacagcttctagggatcacctgctgaagctgtttgacattcgaaacctcaaa
acagaactgcaaactttcaaagggcacaagaaagaggctacttctatagcttggcatcct
atccatgagtcactttttgcaactggcggttctgatggttccctaatgttctggcttgtt
gggtgtgatcgtgaggtgggaagcatggaggaagcacatgatggcatggtttggagtctg
ggctggcatcctctgggccatatacttgtttctggttccaatgatcattcaaccaaattc
tggacacgcaatcgtccaggtgatgagatgagggaccgctacaatttaaacaatttgcca
gctggtgttgagcaagagctgctggaatataatcaagaaccacagctgatgccaaacctg
ccaggcatgggactagagcatggactaccagaccatctccagtccaaagaggagagtgag
tatgaagaacttccaaatatccctggtttagactggaacatggactcgcctttcttcaag
cagcttgatcttaacaaacttccacaaaagaagattccatttgcaaagcctatccctaaa
agctttgagcaagcctggcttggaaacaagccaatggtgccagtagccaatgcaccaaaa
gaagaaaaaaaaggaccacatatgcagcagcaacagcagaaaccatcgcgcagtgatggt
aacaaaggaagcaatggtggtattccaggcctaccaggtgtgactcctgaagccctaagc
attctcctgggcgttaatcctggatccatacctcctgctgcattaatgggaatgctgagc
agtgcaggcaacctgatgcagctgcagcagagtggaatactggcaattcagcagcaagcc
ctcctcctacagcagcaggctgccatgtcacagcaggctttgcagcagcagcagaatgca
tcaggccaggcacctcagggcttgcagcagcaacacaaaccaggagaaaataatccccag
ctacagtcacagctggggcagcagcagcagcaaataccaggtgccttaaagcagcccata
ctaggtcctatgcagcaacaaggcatgccactaaggcctccaatgccatcaccacaacag
ctgcagccaccacagatgcaactgccaaatatgcagcctatgagcatgagaccaatgata
aatcagttccgtccacctatgcctggccaagggcagcaacagcagttgccagcagaaggg
atcaaacaggctggacagatgggcagccagaaccagttccgacctccaggacctggccag
tttggtccatcctgccaacagttcaaacccaagccacagcaaatgggaggacaaccatct
ccaggtaatcagagcataatggatcaggacctcaggcgacctgcaggcccaactactcct
tcctccactccccagcagcctagtagtactttggatatggatttccgacgccaggggact
cctggaacgccagagcagtttggatcggaaggtgacctggacttgaggcacacagggggc
agaggaatgggtgcaggtcgctttccgccacaaggacgagggggtagaggtggagggagt
agcagtgtccccaacaagcaaggggctcagtaccatgacagtgacatgcgtcttcagcaa
cagtactatggtggggagcgggggatgagtgggggtggtggaggaggttatgcagatgat
ggctatggtgaccattacatggaagaacagtatggggactttgatgctcgtggtggtggt
ggtggtggtggtggtggacgggataaagacgatcgttacatgcagggcagtggtggcagt
gctgatggtggctactcaatgcattcagacatgtacggtaatgctggatacaaaggcagc
taccaggacaggcagggtgcaggtcctgcaagagacagaaaccactttgaagaagagcag
caggtgggccgaaaacgccaatgggaggaaggccctggcttaggtgcccgaggccgcccg
caggatccacgtgtgcctggagggcatggaggtgccagaagggggatggtttacaatggt
cctgctggtcctcttgaaggcagaagaggaggtcgaggtcgtggtggttacaggggagga
tggtga
DBGET
integrated database retrieval system
