Pomacea canaliculata (golden apple snail): 112555301
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Entry
112555301 CDS
T05881
Name
(RefSeq) aprataxin-like isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112555301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcan03400
]
112555301
Enzymes [BR:
pcan01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
112555301
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
112555301
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
112555301
DNA repair and recombination proteins [BR:
pcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
112555301
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
112555301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
zf-C2H2_4
zf-C2H2
Cor1
zf-C2H2_6
CwfJ_C_1
zf-met
zf-C2H2_jaz
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
112555301
NCBI-ProteinID:
XP_025079428
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All DBs
Position
LG14:complement(11150186..11153813)
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AA seq
193 aa
AA seq
DB search
MFLTTKMNSKQFGHWSAGLLASMDDPELRISSDEKVVIIKDKFPKAKYHFLILPREKIAN
LKSLSAKHLDLLRHMQKKGEEIADKANRELKFRFGYHAIPSMSHLHMHVISQDLDSPCLK
TKKHWNSFTTDYFIDSKKIIHQLEKTGKIEVNEQETKEFLKADLRCHVCRKEFTTIPALK
SHIVLHNLTKSAG
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgacaacaaaaatgaactcaaaacaatttgggcattggagcgctggtcttctg
gcgtccatggacgatccagagcttaggatatcgtccgatgagaaagtggttataatcaaa
gataaatttccgaaggcaaaatatcattttttgattctacctcgggaaaaaatagccaac
cttaaaagcttatcagctaagcatcttgatcttctccgacacatgcaaaagaaaggagaa
gagatcgcagacaaggcaaacagagaattaaaatttagatttggatatcatgcaatacca
agtatgagtcaccttcacatgcatgtcattagtcaagatctggatagcccttgcctcaag
accaagaaacattggaattctttcactactgattactttattgattctaaaaaaattata
catcagctagaaaaaacaggaaaaattgaggtcaatgaacaggaaacaaaggaatttctg
aaagcagatttaaggtgtcatgtgtgtagaaaggaattcacaacaataccagctttaaag
tctcacatcgttcttcataacttgaccaagtcagctggttag
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