Pomacea canaliculata (golden apple snail): 112555655
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Entry
112555655 CDS
T05881
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan04382
Cornified envelope formation
pcan04512
ECM-receptor interaction
pcan04518
Integrin signaling
pcan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112555655
04518 Integrin signaling
112555655
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112555655
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112555655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcan04147
]
112555655
00536 Glycosaminoglycan binding proteins [BR:
pcan00536
]
112555655
Exosome [BR:
pcan04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112555655
Glycosaminoglycan binding proteins [BR:
pcan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112555655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112555655
NCBI-ProteinID:
XP_025079882
LinkDB
All DBs
Position
LG14:complement(17932961..17962709)
Genome browser
AA seq
1768 aa
AA seq
DB search
MKPREVTSLATLLAVALSVFVDSVSSAACEGCTSNICICAGEKGEQGAPGLPGLQGPQGL
PGFLGPEGPVGPFGLKGDQGEPGAFGPKGYRGDTGLPGFTGVAGTPGQPGLEGPVGESGY
PGCNGTKGLSGVSGLPGVPGEAGRPGRDGLPGPKGEPGELTDVAIGQKGEPGDYGMPGID
GLGGIPGQRGDKGPTGEDGIPGLDGIPGQKGMQGDVGDPGQGIPGEKGMKGDVGPPGTAT
TEQGPENITLAGEKGAKGVQGMKGEQGDEGPTGEEGSAGDVGPVGVKGPQGMDGPSGRRG
KRGKEGPPGPYGQKGMVGEKGFAGQPGLDGIKGMAGDSGYPGRAGPQGPPGPPGEFIPEL
DEGTEGPPGRAGPPGPKGARGLTGDDGEVGREGPVGFPGLPGQPGRPGEVGIPGDSQKGD
RGEPGLPGVDGVDGLSGFPGLAGDPGEKGLQGETVRGPAGAPGLRGGDGLPGLPGPPGDF
GSIGERGLPGTPVRFPGPIGAPGLPGDRGDTGQPGEHGLPGLPGVKGLAGDDCGICPDGI
PGARGDPGDPGLPGQTGFPGPGGFPGPKGEPGEFGRPGEEGRVGPPGFAGRPGPDGLPGP
KGFPGAILPPPSLELFRGPKGAKGTAGFPGIPGTDGSQGDTGIRGMPGLFGLPGLKGDLG
QPGDDGLDGLPGLPGELGRKGLAGQSTIGALGRKGQGGVPGLEGFPGPKGQKGQPGEAFL
IQLDKGDQGESGLPGIDGLPGRDGAPGTRGPRGEDGLPGLPGEKGMVGDPGLPGLPGTPG
FPGPKGYPGPVGDPGFPGVDGLKGESGEDGPPGAPGRPGFPGRKGETPRTAPAGVPGEPG
PSGEYGFPGTPGTPGGSGQPGLPGFVGRKGEPGYEGVPGLPGEPGRPGDAGQPGLPGLAG
FPGEQGRSGQPGLPGIRGDAGLPGLPGEPGRPGDSGRPGLPGPSGENGRDGAIGRQGLAG
LPGLPGIKGERGAMGREGPRGPAGLDGLEGLPGGIGEVGSPGDLGIPGIPGESGPPGLPG
ESGLPGLPGFKGRAGLPGPTGRPGLLGDDGQPGLVGFPGEDGLPGLPGEKGNRGISIPGE
PGRPGQPGLPGLRGLDGLPGPKGQGGVMGIPGLPGLPGPRGRNGTAGEDGRIGQPGFKGM
RGDDGPPGVPGEIGEIGDDGRSGRPGPPGAPGDPGLSGRPGEPGARGPDGDRGRDGRPAL
PGLPGRRGDVGPDGTPGIPGEPGRRGEDGLPGLPGERGLSGDPGRPGRDGFPGEFGRTGP
RGPVGPPGPDGAPAPPGRPGPPGDDGISGLPGIPGERGSMGEDGLNGLPGIKGAKGEPNQ
LVRGPKGFSGEPGLPGLIGRRGAKGIDGMPGLPGLPGMKGVSGLPGESGQPGLDGVEGLP
GLDGDPGFSGLPGRQGLAGEDGLRGLPGQKGLIGEIGYPGPKGSTGRKGVKGATGPRTPF
NNFELLKGSPGDKGFPGLRGLPGDPGLPGTDGFPGFLGRKGEAGEPGFYGLVGESGRPGL
AGGRGRSGTPGFPGEPGRVGVPGVPGAPGTGPGIFFTRHSQTTSPPDCPIGTTKMWDGYS
LLYVVGNGRAHGQDLGDAGSCLRRFHTMPFMFCNINNVCNFASRSDYSYWLSTPEPMTPM
MDPVSGDRIRPYISRCAVCDTPSPIIAVHSQTMVIPDCPQGWSGVWIGWSFVLSTGSGTS
GTGQGLQSPGSCLEDFRTSPFIECHGRGTCNYYATSASFWMTTIERADQFRRPLSETLKA
GDLRRRISRCQVCIKDFGTGPAFFRMVK
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgagagaagtaacatcgctagcaacactacttgctgttgctctctctgtgttc
gtcgattctgtctcgtcagcggcgtgcgaaggatgcacatcaaatatatgcatatgcgca
ggtgaaaagggggaacagggtgctcctggtctgcccggtctccaaggtcctcagggtcta
ccaggtttcctggggcctgaaggtcctgttggtccatttggactgaaaggtgatcaggga
gagccaggggcctttgggcccaaaggatacagaggagacactggcttacctgggtttaca
ggtgttgctggaactcctggtcaaccaggacttgaaggaccagtaggagaatctggttac
ccaggatgtaatggtacaaagggtttgtctggagtgagtggattaccaggagtgccagga
gaggcaggacgacctggcagagatggtttacctggtcccaagggtgaacctggtgaactt
acagatgttgctataggacaaaagggagaaccaggtgattatggaatgccaggaattgat
ggtcttggaggaattccaggacagaggggagataaaggtcctacaggagaggatggtatc
ccgggtctggatggaatcccagggcaaaagggtatgcaaggtgatgtcggtgatccaggt
caagggatccctggtgaaaagggaatgaaaggtgatgtaggtcctcctggtacagcaaca
actgagcaaggtccagaaaacataacacttgctggagaaaaaggtgcaaagggagtacaa
ggaatgaagggggagcaaggtgatgagggtccgacaggcgaggaaggatctgcgggagat
gtaggtccagttggtgtcaagggacctcaaggaatggatggtccatcaggtcgcagaggt
aaacgagggaaagaaggtccacccggaccatacggacagaaaggaatggtgggagagaaa
ggatttgctggtcagccaggtcttgatgggattaagggtatggctggggattctggttac
cctggacgtgcaggtcctcaaggtcctcctggcccaccaggagagtttattccagaacta
gatgaaggtacagagggaccaccaggcagggctggtcctcctggtcctaaaggtgcacga
ggtctcacaggtgatgatggagaggtaggtcgggaaggcccagtaggttttcctggacta
cctggtcaacctggtcggcctggggaggtcggtattcctggagattcccagaaaggcgac
agaggtgaaccaggccttcctggtgttgatggagttgatggcttatctggatttcctggg
ttggctggtgatcctggagaaaaagggttgcaaggagaaactgttcggggcccagctggt
gctcctggtttacgtggaggagatgggctaccaggcttacctggtccacctggtgatttt
ggtagcattggtgagagaggtttacctggcacacctgttagatttcctggtcctattggt
gcacctggtttgccaggtgacagaggagacacaggacagccaggtgaacatggactacct
ggtctacctggagtcaaaggcttagctggtgatgactgtggtatctgccctgatggaatt
cctggagcacgtggtgatcctggtgaccctggacttccaggacagactgggtttcctgga
cctggtggctttcctggacccaaaggggagcctggtgaatttggccgaccaggagaggaa
ggccgtgttggaccaccaggttttgcaggtcgacctggacctgatggtctgcctggtcct
aagggcttcccaggggctattcttccgccacccagtcttgagttattcagaggacccaaa
ggagcgaagggcactgcaggatttccaggaataccaggtacagatggttcacagggtgac
acaggaatccgtggtatgccaggcttgtttgggcttccaggattaaagggagatttggga
caaccaggtgatgatggactggatgggttacctggtcttccgggtgaacttggtcgcaaa
ggtttagcaggacagtctaccataggtgccttaggtcgcaaaggccagggaggtgtacct
gggctggagggctttccaggaccaaaaggacaaaaaggtcaaccaggagaggcattcctc
atacaacttgataaaggtgaccagggagaatctgggctacctggcattgatggtttacct
ggcagagatggtgctccaggtactcgtggtccgcgaggagaggatggactgcctggtctc
ccaggtgaaaaaggaatggtaggagatccagggttacctggattacctggaacacctggc
tttcctggtcccaaaggctaccctggtcctgttggagatccagggtttcctggagttgat
ggcctgaaaggagaatcaggagaagatggcccacctggtgcaccaggaagacctgggttt
cctggacgcaaaggtgaaacacctcgcactgcccctgcaggtgtacctggagagcctggt
ccctctggagagtatggattccctggtacacctggcacacctggaggaagtggtcaacca
ggattgcctggttttgtagggaggaagggagaacctggctatgaaggtgtgcccggcctg
cccggtgaacctggtcgcccaggagacgctggtcagccaggtctacctggtctagcaggt
tttccaggagaacaaggaaggtcaggacaaccgggtcttcctggcattcgtggtgatgct
ggactgcctggcttgcctggagaaccaggacgtccaggtgactcaggaagaccaggttta
ccaggtccctcaggcgaaaatggacgggatggtgccataggaagacagggattggctggt
ttacctggtttaccaggtattaaaggagagcgcggggcaatgggccgcgagggtcctcgt
ggtcctgctggtcttgatggacttgaagggctacctggcggaataggtgaagtaggaagc
ccaggcgatttgggtattccagggatacctggagaatcaggaccgcccggtttacctgga
gaatcaggtctcccaggattgccaggatttaagggaagagcggggcttccaggccctact
ggtcgtcctggactacttggagatgatggacaacctggccttgttggctttccaggagaa
gacggacttccaggtctacctggagaaaagggcaaccgtgggatatctatacctggtgaa
ccagggcgtcccggccagcctgggctgcctggactgcgagggttagatggattgccagga
ccaaaggggcagggcggcgttatgggaataccaggacttcccggcttgccagggccccgt
ggtcgtaacggcacagcaggtgaggatggccgcattgggcagccgggtttcaagggaatg
agaggagatgatggacctcccggcgttcctggcgaaataggcgaaattggtgatgatggt
cgtagcggtcgacccgggcctcctggagctccaggtgatccgggactctccggtcgacca
ggggagccaggcgcccgtggtcctgatggagacaggggccgagacggcaggccggcacta
cctggcttgccaggtcgtcgtggagacgtgggtcccgatggaaccccagggatacctggc
gagcctggtagaaggggtgaggacggtctaccaggattacccggagaacgaggcctatct
ggagacccgggtagacctggcagagatggtttccctggagagtttgggcgcactggaccg
cgaggccctgtgggacctccaggaccagacggagcacctgcacctcctgggcgccctgga
ccccctggagatgatggcatctctggcttgcctggaatacctggagaacggggatcaatg
ggagaggatggactaaacggtttacccggcataaagggagcaaaaggagaacccaaccaa
cttgtccgggggccgaagggcttttctggagagcctggcctgcctggacttataggccgc
cgcggagctaaggggattgacggaatgcctggcttacctggtcttcctggaatgaaaggt
gttagtggtcttcctggagaatctggacaacctggacttgatggtgtggaaggcttgcca
gggctagatggagacccaggattttctggacttccgggaaggcaaggtttagcaggggaa
gatggcttacgaggacttccaggacaaaagggcctgattggagaaattgggtatcctggt
cccaaagggtctacgggtcggaagggtgtaaagggtgcgacaggaccaagaacgcctttc
aacaatttcgagcttcttaaaggcagccctggtgacaaaggctttccaggacttcgtgga
ttacctggtgatcctggactaccaggtactgatggcttcccagggttccttggacggaaa
ggagaagccggtgagcccggtttctatggccttgtaggagagtcgggcaggccgggactt
gccggcggacgagggagaagcggcacacctggttttcctggggaacctggtcgagtggga
gtaccaggtgttcctggtgcacctggcactgggcccggcatattctttacaagacacagt
cagactacttcaccacccgactgccccatcggcaccaccaagatgtgggacgggtactcc
ctcctctacgtcgttggcaacggacgcgctcacggtcaagatctgggtgatgcgggtagc
tgtctgcgccgcttccatacgatgccgtttatgttctgcaacatcaacaacgtgtgcaat
ttcgcttcccgctccgattacagttactggctgtccacgccagagccaatgactcccatg
atggacccggtttccggtgacaggattcgcccgtacatcagccgttgtgctgtctgtgat
acaccctcaccgatcatcgcagtgcacagccagacgatggtgattccagactgcccacag
ggatggagtggtgtgtggataggctggagcttcgtgctgagcaccggctctggcaccagc
ggcacaggacaaggtctgcaatccccaggctcctgtctggaagacttcagaacatccccg
ttcattgagtgtcatgggcgaggcacatgcaactactatgccacgtcggcaagcttctgg
atgacaaccatcgaaagagccgaccagttcagacgacctttgtcagaaactctcaaagcg
ggcgatctgaggagacgtatcagcaggtgtcaggtgtgcatcaaagacttcggaacaggc
ccagcgttctttaggatggtgaagtga
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integrated database retrieval system
