Pomacea canaliculata (golden apple snail): 112555656
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Entry
112555656 CDS
T05881
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan04512
ECM-receptor interaction
pcan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112555656
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112555656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcan04147
]
112555656
00536 Glycosaminoglycan binding proteins [BR:
pcan00536
]
112555656
Exosome [BR:
pcan04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112555656
Glycosaminoglycan binding proteins [BR:
pcan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112555656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
112555656
NCBI-ProteinID:
XP_025079883
LinkDB
All DBs
Position
LG14:17984960..18007910
Genome browser
AA seq
1432 aa
AA seq
DB search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NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtttacctggcctgccaggtatgatcgggatgaaaggtgaaagaggttttcct
ggttccgatggaccagttggtccagttggtcctcaaggtgcacctggtggaaaaggtgag
actggcaggccagggttacctggtcctattggacctgctgggtttccaggagaacctggc
cttcctggtctgcctggtaatgatggaccacgtggacagcctggtccagcaggtgggcct
ggacttccaggccagcctggtccacaagggcgagatggacctaaaggagacaaaggtgac
ctaggtcctgcagggttcccaggtcaggatggacgaccaggcttacctgggcgaccaggc
cccaaaggagacccaggcttgaagggtgagcctggactgaccattcctgggcctgcaggt
cttcctggtcttccagggttggatggagttacaggtgtgaaaggcgagaaaggtgccaag
ggtctgcctggtccatctggcaatgccacccagggattgcccggtcttcctggtcccaag
ggtgataagggtcagcaagggtttcctggtctgcctggacgagatggcattagtggtttc
cctggagagaaaggtaatgatggaggcccatgcgaggcttgcttgccaggctttaaagga
gagaaaggatcacctgggcttgatggtctacctggtttaccaggagaaaggggtgtgcct
ggtttgcttggattcaaaggagaaccaggcgaagatgggcctcctggcattcctggcctt
gctggagtgcctggtgaagaaggattgcctggattacctggagagaggggtccaaaggga
gaagatgctcgccctgaagttattcctggccctgaaggtcttaaaggagaccctggtgcg
cctggtttacctggtgagcctggacgacctgggcgtcctggaccttcaggaccacctggt
gcacctggcctgctgggaccgaaaggagatagaggtgacaaaggattccaagggttagat
ggaaggccaggtccacctggcctacctggcatcccaggtgatgttggtgatccaggcata
ggtattccaggcccacctggtgaaagaggtgatcctggcatgaacggtttgccaggcctg
cctggtcttccaggacaaaagggagaacctggtcgaattgatggtgtcaacctcaagggt
gaaaagggagagcgaggctttgatggcgtgccaggaaaggagggtcttcccggcttacca
ggacttccaggacccaagggtgagtccggactgccagggctgtctggattacctggaatg
aagggcgtaccaggagaacccggtctgactggtgtttcaggacctagaggcttacctgga
cctcgaggtgataaaggacagcctggcctattaggttccccaggtttcactggacccaaa
ggagatccaggtcttccagggcttcctggcatagacggtgaatctggattacctgggctt
cctggggatgccctagaaggcccacctggtctccgtggaaaccctgggtctcctggtccc
cccggagaaaagggtcgtgactgcttaccaggtgaaccaggtattcctggattacctggt
cccaaaggagctcgtggtgaggatggcttacctggactcccaggtcgagatggtcccaaa
ggtgagactggacctgctggattgcctggaattagaggtgaagatggactccctggtctg
ccaggcacacctggtgatgttggtccaaaaggtgaagccggacttccaggtttgcccggg
ttgtctggacctaaaggtgatagaggtacagatggccttccaggtgaaccaggattgcca
ggacttgatggcttgcaaggacctcccggtccagctggtgaagatggccttccaggttta
cctggtctgaagggtgatatgggacaagttggattcccaggagaaactggtcctgaaggg
caacctggtttgccaggtttaccaggtgcaaaggggttgaagggtcaacgtggacttcca
ggagaaccaggtctacctggattgagaggtcctaaaggagattcaggcttacctggcttg
cctggtcagcccggagaaaatggagaacctggtctgcctggacttacaggtcctaaagga
gatcaaggactacctggcatacctggagaaagaggagacacaggtcgtccaggattacca
ggcttcaaaggagagacaggggagccaggtataggtgagccaggattgcctggactacca
ggagaacctggcagagatggtgagcctggtagacctggcttgccaggactgcctggtgac
aagggcttacctggattcccaggagaaagaggatttccaggtgaacctggtgagtctggt
cgcccaggtctcccaggacttgacggtctacctggcatgaaaggaaatgctggacttatt
ggtatcccagggttcccaggagagaaaggagactctggcttgcctgggttagatggacca
gctggtctcaaaggcgaacgaggacaaccaggtcttgatggcctacctggtttgcctggc
ctgaagggagcacctggccgtgatgggctggatggtgaaccatgtttgccaggaccaaag
ggtgaaataggccaacctggtcttcctggcttacccggtctatctggagaaaaggggcag
gctggtctaccgggtttgcctggcttgattggagaaaaaggtttccctggcccagctgga
aaggatggtttgcctggttcacccggccctgatggtgaaagagggcctgctggtccagca
ggtctacctggtttgccagggctgccatccgttggactgaagggtgagccaggtcgatca
ggagttcctgggcgagatggtctgacaggtccaaagggagaagcaggtttacctgggctg
gatggcttaccaggcatgaagggagaaccatgcactgagcctggcattggacaacgaggg
ccaaaaggtgaaccaggcttccctggagcaccaggcttagatggctcaccaggtgttcgt
ggcaatgatgggttgccaggcttgcctggactgaagggcgacccaggtgagccaggatta
ccaggtgaacgaggcagagatggcctaccaggcctaccaggactgaaaggactaccaggc
ttgcctggagcacctggtcttgatgggcgtaaaggtgaaccagggcttacgggacttaaa
ggagatataggaccaaaaggagacaggggtgatactggcgttccgggcttacctggtgca
gcaggccttcctggagagatgggagagccaggtccacccttggacgtaacaatggtgcca
aaaggtgacaagggtgacagaggagaacctggaagccctggtctaaaaggtttacctgga
tctgtcggtgccccaggtctaccaggtctgccaggtcgtgatggattaaagggtgaacct
ggcctccctggcttgccaggaccagagggtccagaaggtcccccaggtatcgccggtgtc
ccaggtattgatggaggaccaggagtgccaggtcccaagggtgaaccaggaccacagggc
ttgactggttctacacctcctactggttatctccttgttcgccacagtcagtcaacggag
gttcccagctgtccccgtggagaaaaccaactgtgggagggctacagtcttctgtacatc
gaaggcaacgagcggtctcaccatcaagaccttggctgggctggttcctgcctgcctcgc
ttcagtaccatgcccttcctgttctgtaacatcaacaacgtctgcaattatgccagccgt
aatgaccgttcatactggttatccactaacgctcccatcccaatgatgccagttggagag
cgagacatcgtcccatacatcagtcgatgtgtagtttgtgaagcgccagccaatgttatt
gcagtgcacagtcagacgcttcaaatcccagcttgccctaatggatggaacagcctgtgg
attggctacagctttgctatgcacactgctgcaggaccaggtggcggtggccaatccctg
tccagtccaggatcctgtctggaagatttccgcgccacacctttcattgaatgtaatggt
gcccgtggaacctgccactactttgccaacaaatatagcttctggctgtcaactatagaa
accaatgagcagtttgcctccccaagacctcagacgctcaaggctggcaatttaagaacc
cgagtcagtcgatgccaagtttgcatcaaagatgtgtga
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