Pomacea canaliculata (golden apple snail): 112555826
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Entry
112555826 CDS
T05881
Name
(RefSeq) regulator of nonsense transcripts 3A-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03013
Nucleocytoplasmic transport
pcan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112555826
03015 mRNA surveillance pathway
112555826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112555826
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112555826
mRNA cycle factors
P-body specific factors
112555826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
112555826
NCBI-ProteinID:
XP_025080140
LinkDB
All DBs
Position
LG14:8947213..8958348
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AA seq
637 aa
AA seq
DB search
MTQEKLEKIPRKDDKKVDGKRKDKDHPPTKVVVRRLPPSLTPENFLEQVAPLPTYDFFYF
VRADLSLGQYAFTRAYINFQNPEDVFSFRDKFDGYVFLDSKGNEYPAVVEFATFQKVPKK
KAKKGDAKKGTIEQDSDYKRFLETLQNPEPESSVSIDTYLEELEERERQQKASSGNRLTT
PLLEFLKRRKEERKTAFLKMREERRRREVERRRVKEDDRRPRKDPSDREGSGRDMRDRGQ
GRDKQWETDRQRDKVLEKGHDYKAGRDKDVGEKTEGFHHHHPVKLLKNTEREKEREAERG
LPHEKDSFRAREERESKTSGRENLRFSKENRERERAEREKINRGDRGKPVNRAGTGNRGE
RSKPQQEDTYRRDDQYQQDERPHPGYRDRREKVREKERGMERLDRQKDGERDKNKKNDRD
RDQRGPRSRLQEREGEWSRENREREGGQRRDKGQAGSSTAAKREAGKEGSRDENSGASSS
KRDQDLPPRDRDRHRGERSVASKVGESMKQREDQGSPVLATTRKNREDKSQAHSKTRDPS
TEGEGNKLDPEDRRRKRKERPERQIYVPPKALERRQKQEAAKETKRETGQGDSQSQSDKG
EGQDLKRDAPVQQEASLAKQERERVQVRERLRNRGER
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagaaaaattggaaaagattccaaggaaagatgacaaaaaagtagatgggaaa
cgaaaggataaagatcatcctccaactaaggttgtggtgaggcgccttcccccatccctc
acaccagaaaatttcctggagcaggtggcaccattaccaacatatgacttcttttatttt
gttcgtgcagatcttagcttgggccagtatgctttcaccagggcatacattaatttccag
aatccagaggatgtattctctttcagagacaagtttgatggctatgtgttcctggattcc
aaaggcaatgagtaccctgcagtggtggagtttgccacattccagaaggttccaaagaag
aaagcaaaaaaaggagatgccaagaaaggaacgatagaacaggacagtgactataagcga
ttcctagaaactcttcagaacccagaacctgaatcctctgtgtccattgacacatacctg
gaggagctagaggaacgcgagcgtcagcagaaagcttctagtggtaatcgactgacaacg
cctttgctggagttcctcaaacgtcgaaaagaggaacgtaaaactgcctttttgaagatg
agagaagagcgcagacgtcgtgaagtagaaaggcgacgagtaaaagaggacgacaggcgt
cctcgcaaagacccaagtgacagggagggctcagggcgggacatgcgagaccgaggtcaa
ggtcgagacaagcagtgggaaacagacaggcagcgtgacaaagtgctggaaaaggggcat
gattacaaggctgggagagataaagacgtgggggaaaaaacagaaggctttcatcatcac
catcctgtcaagttgttgaaaaatacagagcgagaaaaggaaagagaagcagaaagaggt
cttccacatgaaaaagactcatttagagctcgcgaggaaagagaatcaaaaactagtgga
cgtgaaaatctgcgtttttcaaaggaaaatcgtgaacgtgaaagagcagagagagagaag
attaatcgtggagacaggggtaagcctgtgaatagagcaggaactggaaacagaggagag
cgcagcaagcctcaacaagaagatacttatcgacgtgacgatcagtaccagcaggatgaa
agaccgcatcctggctacagagaccgaagggaaaaggtccgagagaaagaacgaggcatg
gagcgcttagacagacagaaagatggagaaagagataagaacaagaaaaacgatcgtgac
agggatcagcgtgggcccagatcgcggctgcaggagagagagggggagtggagtcgagag
aatagggagagagaaggaggacagagaagggataaaggtcaagcagggtcaagcactgca
gctaaaagagaagcaggcaaagaggggagccgtgatgaaaatagtggtgctagcagcagc
aagagagaccaggatctgccgccacgggatcgggacagacatcgaggtgagcgtagtgta
gccagcaaggtcggggaaagcatgaaacaaagagaagaccagggaagccctgtgttggca
accacgagaaagaacagagaagataagtctcaagctcactcaaaaaccagagacccatcc
acggaaggagaagggaataaacttgatcctgaagatcgaagacggaaacgaaaggaacga
ccagaaaggcagatctacgtgccgcccaaagctctggaacgccgccagaaacaggaggca
gccaaggagacaaaacgggaaacaggtcaaggtgacagtcagagtcagagtgataaaggt
gaaggccaggatttgaaaagggatgcaccagtgcagcaagaggccagcctagcaaagcag
gagagagaaagagttcaagtgagagagagactgaggaacaggggtgagcggtga
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