Pomacea canaliculata (golden apple snail): 112555865
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Entry
112555865 CDS
T05881
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112555865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112555865
03012 Translation factors [BR:
pcan03012
]
112555865
Enzymes [BR:
pcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112555865
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112555865
Translation factors [BR:
pcan03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
112555865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
nSTAND3
AAA_19
AAA_22
NPHP3_N
AAA_16
ATPase
NACHT
TsaE
AAA_23
Motif
Other DBs
NCBI-GeneID:
112555865
NCBI-ProteinID:
XP_025080211
LinkDB
All DBs
Position
LG2:complement(33776005..33790727)
Genome browser
AA seq
1109 aa
AA seq
DB search
MKEILQFLHNRIFFNTCIKCIAMHRGHNYGRGGGGWRGNHGRKHGGKGWDSNDNGREESG
GRGERPPPGLKGREIGMWFARRSKAKKEQQEKMNRQSVVMDQQKEANIRSLLNDIREGDK
VPPQVFRGFDKFENSEDWWDERPGASQSTSAANASCDDVIESWEDIPEETNESNRKWNQN
LCQPESSIESKACSSSDFRVKAELAELSSHDDQEKSVSVQNNDSSQALPFASTAACVKTE
DEDTDDEELKEEVPQMVALLEYSRAHGDVFYLSEETTADYFLKEEDMSATEEMNRLNKQL
SEQAEQRLGDKAYLKMLSFREKLPSYKMREEIVRLVHNNQVVVISGETGCGKTTQVPQFI
LDDYISRGAGSQCHVICTQPRRISAISVAERVAAERCEKCGGENSSVGYQIRLETCQPRR
HGSILFCTTGIVLKFLEGDPLLKRATHIVLDEIHERDLQSDFLMIILKDLLASRPDLKII
LMSATLNAEMFSRYFYKSPMINIPGFTFPVQEFLLEDILEIIRYQPDPAKIQQPKKQCRW
KDREKADEEAWNYGAWLRNLHGKYSRKTIDTWILIVAIIYHIVREKEDGAILVFVPGWEE
ISNLNKLLQKNPFFQSERYRIIPLHSMMPTVNQREVFDRPPPGVRKIIIATNIAETSITI
DDVVFVIDCGKIKVKDYQPEKNLSCLESKWVSRANARQRRGRAGRVQPGYCYHLYTELQW
MEMADYIPPEILRTRLEELCLQIKLLKLGRIEPFVSKAMQPPSMEALHKAIVNLQELNAL
DAEENLLPLGKHLARMPLEPHTGKMILFGAMFCCLDPILTVAASLSFKDAFFTPLGKEKE
VDSARRELSGGHKSDHIVLINAMKGWERSLSRGTDKNYCWQNFLSSTTLRMLKDMKKQLA
ELLYDLGFLASRNPKDGQANVHSDNIGLVKAVLCAGLYPNVAKVNKTPRPGAPPYKMVSL
HTKESKVTVHPRSINCRETEFPSKWLVYYNILKTTKVFVHDCTMLSPYPLLFFGGHIKIV
QDGQHECISVDDWIVFKASRSTAQLVKDLRQQLDRLLEDKIIHPGVTTWSRTEKEGALMH
AILELISTEESVGGKDAKYHRKSRLGHNS
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatattacaatttttacataacagaatattcttcaatacttgcattaaatgc
atagccatgcaccgtggacacaattatggtagaggtggaggtggctggagggggaatcat
ggtagaaaacatggtggaaaaggttgggacagtaatgacaatggtcgagaagaaagtgga
ggtcgtggggaacgccctccaccaggacttaagggtagagaaattggaatgtggtttgca
agacgaagtaaggccaagaaagaacagcaagagaaaatgaatcgccagtccgtagttatg
gatcaacaaaaggaagccaacattcggagcctgctcaatgatattagggaaggagataaa
gtcccacctcaggtttttcgaggctttgataaatttgaaaacagtgaagattggtgggat
gaaaggcctggtgcttctcagagcacttctgcagctaatgcttcatgtgatgatgtcatt
gagagttgggaagacattcctgaggagacaaatgagtccaatcgtaaatggaatcaaaat
ttatgccagccagaaagttcaatcgaatctaaggcttgttcatcctcagactttagagtg
aaagcagaactcgcagagttgtcatctcatgatgatcaggaaaagtctgtcagtgtacag
aataatgacagtagccaggctttaccttttgcttctactgctgcatgtgtcaagactgaa
gatgaggacacagatgatgaggaactaaaggaagaggtgccccagatggtagctttactt
gaatacagtcgagctcatggggatgtcttctacttaagcgaggagacaactgcagattat
tttttgaaggaagaggatatgtcagcaacagaagaaatgaacaggctgaacaagcagttg
agtgagcaagcagaacaacgccttggtgataaggcttatctcaaaatgctgagcttcaga
gagaaacttccatcctacaagatgagagaggagatagtaagattggtgcataacaaccaa
gttgttgtcatcagtggcgaaacagggtgtggcaaaactactcaggttcctcagtttatc
ctagacgattatattagcagaggagctgggtctcagtgccatgttatctgcacacagcca
agacgcatcagtgccatatcagtggctgaacgtgttgcagcagagcgctgtgaaaaatgt
ggaggagaaaattcaagtgtggggtaccagatccgacttgaaacatgtcaacctcgaaga
catggctctatactcttctgtactactggcattgttctgaagttcctggaaggggatcca
ttgctgaaaagagcaacgcatattgttctggatgagattcatgaacgtgacctgcagtct
gatttcctcatgataatcctcaaagacctgttggccagccgacctgatctgaaaatcatt
ttaatgtcagctactcttaatgctgagatgttttctcggtatttctacaagagtcctatg
atcaacattccaggcttcacatttccagtgcaggagtttttgttagaagatattcttgaa
atcatcagataccagccagatccagccaagatccaacagcccaaaaagcagtgcaggtgg
aaagatagagaaaaggcagatgaagaagcatggaactatggagcttggctgagaaattta
cacggaaaatattcccggaaaacaatagatacctggatccttattgtagccatcatttac
catattgtgagagaaaaggaagatggagccatccttgtgtttgtgcctggttgggaagaa
ataagcaatttgaacaaacttctgcagaagaatccattcttccagtctgagaggtacaga
atcattccattgcattctatgatgcccactgtcaatcagcgtgaagtatttgatcgacca
ccaccaggagttcgcaagattattatcgccacaaacattgcagaaactagtatcacaatc
gatgatgttgtgttcgtcatagactgcggaaagattaaggtaaaggattatcagccagag
aaaaatctatcctgtctggagtcaaagtgggtttccagggccaacgcaaggcaacgccgt
ggccgagctggcagagttcagccaggctactgctatcatctgtacactgaactgcagtgg
atggagatggctgattacatccctcctgagattctgcgtactcgcctggaagaactctgt
ttacagatcaagctcttgaaattgggccgtattgagccttttgtgagcaaagccatgcag
ccaccatccatggaggctctacacaaggctattgtaaacttgcaggagctgaatgccctt
gatgcagaagagaacctgctgccgctgggcaagcacctggcacgcatgccattggaacct
cacactggcaagatgattctttttggagcaatgttctgctgtctggaccctattttgact
gttgctgcaagtttgtcctttaaagatgccttctttacaccattgggcaaggaaaaagaa
gtagactcagccagaagggagttatcaggtggccacaaaagcgaccacattgttctcatc
aatgccatgaagggttgggaacgcagtctctcaagaggaacagacaagaattactgctgg
cagaactttctgtcatccaccacattaaggatgctaaaagacatgaagaagcaactggca
gagcttttgtatgatctgggttttttggccagtcgtaatcctaaggacggtcaagccaac
gttcactctgataatataggtttggtgaaggcagtgttgtgtgctgggctgtatcctaac
gttgccaaagtgaataaaacaccaaggcctggcgcaccaccttacaagatggtctcactt
cacactaaagaaagtaaggttacagtgcatcccagatccatcaattgtagggagacagag
ttcccttccaagtggttggtgtactacaacatactcaagacaactaaggtgttcgttcat
gactgcacgatgctgtcaccctatcccttgttgttttttggtggtcacatcaaaattgta
caggatggtcaacatgaatgcatttcagtagatgattggatcgtcttcaaagcttcacgc
agtactgctcagttagtgaaggacttgcgacaacaactggacaggctgctagaggacaag
atcattcatccaggtgtgaccacttggagcagaactgagaaagaaggggcactcatgcac
gctattctagaactcatttcgacagaggaaagtgtaggaggaaaggatgcgaaatatcac
agaaaaagtagactgggccacaattcatag
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