Pomacea canaliculata (golden apple snail): 112556013
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Entry
112556013 CDS
T05881
Name
(RefSeq) DNA repair protein XRCC4-like isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112556013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcan03400
]
112556013
DNA repair and recombination proteins [BR:
pcan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
112556013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
KASH_CCD
IKBKB_SDD
Leu_zip
Nup54
Radial_spoke_3
PAXX
ZapB
DUF3490
Flagellar_rod
Med21
XLF
ALMT
DUF3450
Cep57_MT_bd
COG4_N
DUF4164
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
112556013
NCBI-ProteinID:
XP_025080388
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MDTSFVKLQLTDWRNKTCFLLTRLKSEGKEGLHLMLTDGEQFWEGELTEEDLDSLSSNLK
MDFNSYVGQTVMALTKPHSSEFSFAYHLKQQAEGVVDFLWKKAATEDIKILMGSVLLHSQ
TDAVRALAHIFDACIGSAEELHNRIHSLETENQRLSQERQNALKRLEKCVSAKEELERDL
YSKFVTVLNSKKAKIRALKQGDEEIMDVIEETSNTSSRGQKSRVNKTSSTVNLDKSLPGD
DSPYSNNEEDRAGDTDDEKPAKKKRGPVDQSAGDGESSLVLGDDGGNNQEKEKRVTRPVR
NRGRGKQPLARPARTVLPKLSSLSSGVGSRYALSSSRTSNRSNMRKSGSGQLDRSGDNLD
TDDLLNDF
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggatacatcatttgtgaaactgcagctaactgactggaggaacaagacatgtttcctt
ctgactcgtctaaaatctgagggcaaggaaggattgcatttgatgcttaccgatggagaa
cagttttgggagggggagttaactgaggaggatcttgattctttgagctctaatctgaag
atggatttcaacagttatgtcggccaaactgtcatggctttgacaaaacctcatagtagt
gagttcagctttgcctaccatcttaaacagcaagcagaaggggtggtggacttcctctgg
aagaaggcagcaacagaagatatcaagatacttatgggcagtgtgcttcttcatagccaa
acagatgcagttagggcccttgcccatatatttgatgcctgcattggctcagcagaagaa
ttacacaacagaattcactctttagagactgaaaaccagaggctgtcacaagaacgacaa
aatgcactaaagcgtctggaaaagtgtgtgagtgctaaagaggagctggaaagagatttg
tactccaagtttgtgacagttcttaacagcaagaaggctaagatcagggccctgaaacaa
ggtgatgaagaaatcatggatgttatagaagagacttcaaacacatcttctagaggccaa
aagagcagagtcaacaagacatcttctacagttaaccttgataaaagtcttccaggtgat
gacagcccctattcaaacaatgaagaagacagagctggagacacagatgatgagaagccg
gccaagaagaaaagggggcctgttgaccagagtgcaggagatggagagtcatcacttgtt
cttggtgatgatggtggcaacaaccaggagaaggaaaaacgggtaactcgacctgtcaga
aacaggggaagaggtaagcaaccactggctagacctgctaggactgttctaccaaaactg
tcctctctgtcttcaggagttggaagcaggtatgcattgtcaagttccagaacatccaac
agatcaaacatgagaaaaagtgggtctggtcagttagaccggtcaggagataaccttgac
acagatgacctgttgaatgatttttga
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