Pomacea canaliculata (golden apple snail): 112556496
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Entry
112556496 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112556496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcan03021
]
112556496
03036 Chromosome and associated proteins [BR:
pcan03036
]
112556496
Transcription machinery [BR:
pcan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112556496
Chromosome and associated proteins [BR:
pcan03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112556496
PBAF complex
112556496
GBAF(ncBAF) complex
112556496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
112556496
NCBI-ProteinID:
XP_025081340
LinkDB
All DBs
Position
LG2:complement(15776801..15796698)
Genome browser
AA seq
1219 aa
AA seq
DB search
MALQRKKDGGPNAKFYETVETIAQFDSVRTWLYKNCKKFTQADPPTNKGLANLTVQLLQF
QEETFGKQNTNPALTKLPNRLFLDFKPGGALCQIFAAVYKFKSEQGWRRFDFQLPSRMDR
NVEMFMQIEKSLVNQKLLQLPSIFIRPDVDKILQPKLKDIIKRHQGTIADSEENATHIVY
TLPSHPPPDEEYFRPVMRRDRDCMVHWWYYPESYDTWVTDVVLDYNIEPPVPKQRDGPWE
VSARWLLDLEEFNEWMTEEDYLVDDEFEPETKRGKKSGLLRLTMEDIHENQDSDRQGKRQ
KKTAKRKRSPSPQQEKLKRKSSRTSAISGPRKKGRWEEEEEDLTKDMEDPPSEPSIQEVQ
LAKQVFPIVPGSRSQRDTENQPIKGGTVMDLDEEMADKAEVPMPETATDDVDKKRDDMDA
DDTLTEQTHHIIIPSYSAWFDYNGIHAIERRALPEFFNSKNKSKTPEIYMAYRNFMVDTY
RLNPTEYLTSTACRRNLAGDVCAIMRAHAFLEQWGLINYQVDADTRPTPMGPPPTSHFHI
LADTPSGIAPINPPRINQPSAAQQVVDLSDKKDKEADGSXPGLGSFGLRMDAYAKKMLKD
KGAAAKSREWTDQETLLLLEALEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDGFLED
DFGGHCGGLGPLAYQPIPFSQSGNPIMSTVAFLASVVDPRVASAAAKAALDEFSRMKDEV
PPTLVDAHTKMVAEAVKEGKQITPEFGLSDTGIAGTGNDPPDDGKLEETKEDKKDETTEK
KDEKSKEETMELDATEIKTEDDQKEDKKEEMEKDKEGKDMKEETEKEEKKEEKKTEEERK
KEKDAEGVTEEKKDSENGTPAALTKTDEDKDRPREEKSPEKKAEEEKLQEDAAASISTAA
AAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEY
QRQQLLQERQQFHLEQIRAAEYRARQIAMTQLAAEQRQQAASTASPDQGGQPTSIVAAGS
AASQNPALAAAVGQGGYPMHGSPMPPQGPQVQASTMSQGSPAPPTPAATSSTVQTTQSLH
QAPLSIGSTGGLALCSGAKDCSSSPPNQVSGEGMETGEGKPPASPLPSSTACAPTSGLPQ
SDQCCSEEQQQQLTPQADSQSNNISQPSSLEQETQASSIQLPATQTQTIPPLVPLPDQGE
GPGGTSEGSENSCTVPGSS
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcaaaggaaaaaagacgggggcccgaacgcaaaattttacgagactgtagaa
acaatcgcacagtttgattcagttcgaacatggctgtataaaaactgcaaaaagtttact
caggctgatccacccaccaacaaaggactggccaatctcactgtgcagttgctgcagttt
caagaggaaacctttggcaagcaaaatacaaacccagccctcacaaagcttccaaatcgc
ctgtttcttgactttaaacctggaggtgctttatgccaaatatttgctgctgtttacaag
tttaaaagtgaacagggatggagacgtttcgatttccagctgccttcccgaatggatcgc
aatgttgagatgtttatgcagattgaaaagtcacttgtgaatcagaaattactgcagttg
ccatccattttcatccgaccagatgtggacaaaatcttgcagccaaagctgaaagatatc
atcaagagacatcagggaaccattgcagatagtgaggaaaatgctacacacattgtgtac
acgctgccttctcatccaccaccagatgaggagtacttcaggcctgtaatgagaagagat
cgtgactgtatggtgcactggtggtattacccagaaagctacgatacctgggtgactgat
gtagtccttgattataatattgaaccaccagtcccaaagcagcgagatggtccttgggag
gtgtcagctcgatggttgttggatttggaagaattcaatgagtggatgacggaggaagat
tatctggttgatgatgagtttgagccggaaactaaaaggggcaaaaagtctggcttgttg
cgactaactatggaagatattcatgaaaatcaggactctgacagacagggaaagcggcag
aagaaaactgccaagcgtaaacgctcaccatctccacaacaagaaaagctcaagaggaaa
agctctcgtacttcagcgatcagtggccccaggaagaaggggcgctgggaagaagaagag
gaagacctcaccaaagacatggaggatccaccctctgaaccaagcattcaggaggtgcag
ttagctaagcaagttttcccaatagtacctggatcacgaagtcagagagacacagaaaat
cagccaatcaaaggaggcactgtcatggaccttgatgaagaaatggctgacaaggcagag
gtcccaatgccagaaactgcgacagatgatgtggacaaaaaacgtgatgacatggatgca
gatgacacattgactgaacagacacatcacattatcatacccagttactcagcctggttt
gactacaatggtatccatgcaattgagcgcagggctttgccagaatttttcaattctaaa
aacaagtcaaaaactcctgaaatctacatggcatatcgaaacttcatggtggacacctat
cgtctgaacccgactgaatacctaacaagtacagcctgcaggcgcaacttagcaggagat
gtttgtgccattatgagggctcatgcttttctggagcaatggggactaataaattatcag
gtagatgcagatacaaggccaacgccaatgggtcccccaccaacgtcacattttcatatc
ctggctgacacaccatctggcattgccccaatcaaccctcctcgaattaatcagccatca
gcagcacagcaggtggtggatcttagtgataaaaaggataaagaggcagatggatcgnnt
ccaggccttggttcatttgggcttcgaatggatgcgtatgccaaaaagatgctcaaggac
aagggtgctgcggccaagtcacgagaatggacagatcaagagactttactcttgctggag
gcgctggaaatgtacaaagatgattggaacaaggtctgtgagcatgttggaagccgcaca
caggatgagtgcattctgcacttcttgcgattgccaattgaagatggattccttgaggat
gattttggtggtcactgtggaggattaggacctctggcatatcaaccaattccattctca
caaagcgggaaccccatcatgtctactgttgccttcctggcgtctgttgtcgaccccaga
gttgcaagtgcagcagccaaggcagcccttgatgagttttcacggatgaaagatgaggtt
cctccaacattagtggatgctcacacaaagatggttgctgaggctgtgaaagagggcaaa
cagataacgcctgaatttggtctcagtgatacaggcattgctggcacgggaaatgaccct
ccagatgatggtaaattagaagagacgaaggaagataagaaagatgaaaccacagaaaag
aaagatgaaaagtccaaggaggagacgatggagttggatgcaacagagatcaagactgag
gatgatcagaaggaagataaaaaagaggagatggagaaagataaagaggggaaggacatg
aaagaagagactgagaaagaagagaagaaagaggagaagaagactgaagaagaaaggaaa
aaggaaaaagatgcagaaggtgtcacagaagaaaagaaagacagtgaaaatggaacgcct
gctgctttgacaaagaccgatgaggacaaagatagaccaagagaagagaagagtcctgag
aagaaagcggaggaggagaaactacaggaagatgcagctgctagcatttcaacagctgca
gcagcagcattagctgcagctgctgtaaaggcgaagcacttagctgcagtggaagagcga
aagataaagagtcttgtggcactgcttgtagagacacaaatgaaaaagcttgaaataaaa
ctgcggcactttgaggaactggaaacaattatggatcgtgagcgggaggctctggagtat
caaaggcagcagttgcttcaggagagacagcagttccacctggagcagatccgtgctgca
gagtatcgagcacgtcagattgcaatgacacagttggcagctgagcagagacagcaagct
gcatctacagcctctcctgaccagggtggccagccaacatctattgtagcagcgggatcg
gcagcttctcagaacccagccttggcagcagctgtcggacaagggggctacccaatgcat
ggctcccccatgcctcctcagggacctcaggttcaggcctccaccatgtcgcaaggctcc
ccagcccctcctactccagcagcaacctccagcacagtccaaacaacacagtctttgcac
caggcacctttgtcgattggatccacaggtgggctagctttatgttcaggtgccaaagat
tgttcttcctctccacccaaccaggtgtcaggtgaaggaatggaaacaggtgagggaaag
ccccctgcctcacccttgccttcatccactgcctgtgccccaacctcaggtctcccccag
tcagaccagtgctgctcagaagagcagcagcagcagctcactccgcaggctgactctcag
agcaacaacatatctcagccatccagtctggaacaggaaacccaggcttcctccatacag
ctgccagctactcagacacaaaccataccaccactggtgcctcttccagatcagggcgaa
ggtcctggagggacaagtgaaggttcagaaaacagctgcacagttccaggttcctcttaa
DBGET
integrated database retrieval system
