Pomacea canaliculata (golden apple snail): 112556989
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Entry
112556989 CDS
T05881
Name
(RefSeq) vacuolar protein sorting-associated protein 13A-like isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcan04131
]
112556989
Membrane trafficking [BR:
pcan04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112556989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
Motif
Other DBs
NCBI-GeneID:
112556989
NCBI-ProteinID:
XP_025082317
LinkDB
All DBs
Position
LG2:22181559..22240443
Genome browser
AA seq
1747 aa
AA seq
DB search
MVFESLVVDLINRFLGDFVENLDTSQLKIGIWGGSVVLDNLNIKESALDELDLPVKVKAG
HISKLVLKIPWTNLYTEPVIAEIDGIYALAVPNIGVKYDAKKEEKILQDIKQKKLAQIEE
AKKLEAERRQPKEVKKDTFAEKLTTQIVKNLQVKVNNIHVRYEDCYTNPARPFSFGITLQ
ELLFQTTDEEWNPCIIKEAVTQIYKLVKLDSLSIYWNCYSNLLNQEESSVILDSLRSNIA
GHGAKPEYQYVVRPISSVAHLRLHTKPEQKEFSIPKIGLTVVFDEIAIGLSKDQYDDILE
MMESLERMTLLSVYRKYRPDKPLSGNTVLWWHYAYDSVLNETVRRRRQMWSWHHIAEHRK
IMKTYREAYLIKLDKKLSAAVQKILDNSEKQLDVFNITLMRQQAEVQAAKQGAQRKESSS
KSWFSGLFGKRKSSDSLEEEIKPGEMQEKFYELYTAEEKAKLYNAIGYEENEMTLVYPKE
YEAVKVVTKFRNVAIFLRDRQSKDVHFLHRRETFFRQHQLLKLQLKDVYSYFGQRPAAGA
IHLDAKIDRMVVSGTPQNDAAPRLITSQIQDAKEQIYSLANLSIATNPLDGLCDTRIRFK
GRPLEIVYDAVTINKLAEFFKPPKSVELKQLSQAAMSKFDEIKEQSTAGIQHALQQHKYT
DIGVDLMPSIIIVPEGGLMKNDVRKLILDLGQLTVVSSKHDTSIDPQIMSVFGQQVLELA
EKLKKAYDRFDIRLQRMQLLLANPGENWQLACTAGQSPQHVLSPMDILLDIRVCIFDKDP
RMAKTKVHGVLPNLSLRISDKRVHEIMTLALSIPLPESAPVDEEPETEMFKGPSDLPASL
TALSTSRIVNTAIIATAEHTDKERAPELRRLSSVEYTNMTDMELNFEIKEMVAVLSQRQG
DTEIPVLKLMVESVGTEVQMRRFDMLVDAHIGTVYAQHLKYQLSNRINEELLSTGAVSSG
PLINLVNTPSVGEDQKLLSVTFLQAKKTGPEFSTLYRNIEKNIQVNFSAVEILLHQRAIL
DLMELANSLVPPSTDDSQQSKNLSDDKAEAGSSLELWKEKEKGSKKRKEDPNLINLKVTV
VLSKFSVGVCNDERLITNVQIKGICAEVAIQQARTTVSAILRETTVFDPDPHTRYHRILC
IEGSNVLKAGAVVYNGGTAGNKYSDMSCFDTGVDVEIGCIKVFFVNKFISDLLGFMDNFQ
AAKDQMQKAGQVAAQVGMDTVQSLQETATRLLLKVNMKAPVIVVPQNSTSSNTLMLDFGQ
LSITNSFKLAGKLSPNNVPAILEEMNIVLTSLKLSRALMKGDTDISAECLILEPLTVSLQ
MRRNLSASWYHESPELELCGALEPLNVRLSQGDFGTMMQILNENLREGQPQASTKSNAVA
SSHSPETVVPSVSTTSKMLTEMEKHRPEVYVRIKVDVQLKGVIAVFYSGDTVLTSGICKR
EPSSSLGKFELVSMSAVAIIMSNDALKAKVSLNDLILDDLRLSKRTGITRMIERSKSGRN
HSSDMVCVDFQQDAEKCLNVKISISSLYICVCVEFLMSLANFFTQGLGEISDSALKPKHG
AMQSGLTPPVHSDQKQELQIMEVVLEMEKPEIILIEDQMNQSTKSLAVDLALSFRLIQTP
EVQKINAGINGIQVFMCTFDSRHIPSHQILVPFDISVVSSAPYGQNHHVDVTFSDIVLVI
SPSILTTISLISRGLTPEGSKTSPLFLSTLASVPKWKVPANLWDVKTLASCNLWYIESAK
QETKEQT
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgaatcgttggttgttgatcttatcaatcgctttcttggtgattttgtggaa
aatttggatacatcccaactgaaaattggaatatggggaggcagtgtggttcttgacaat
cttaacataaaagagagtgcattggatgaacttgacctacctgtgaaagtcaaagcggga
cacataagcaagcttgtcttgaagatcccctggacaaatctgtacactgagccagttatt
gctgaaattgatgggatttatgcacttgctgtaccaaatattggagtcaagtatgatgca
aagaaagaggagaagatactacaggatattaaacagaagaagcttgcccagattgaagaa
gccaaaaagctggaagcagagagaaggcaaccaaaagaagtcaagaaagacacttttgct
gagaaattaactacacagatcgtcaaaaacttacaggttaaggtcaacaatatccatgtt
cgttatgaggactgctacaccaatcctgcacgacctttttcctttggcatcacattgcag
gagctgctttttcagacaacagatgaagagtggaacccatgcattattaaagaagcagtc
acacagatttataagttggtcaaactagactccctttccatctattggaattgctactca
aatttgctgaatcaagaggagagttctgtcatattggattccttgcgaagtaacattgct
ggtcatggagcaaaacctgaataccaatacgttgttcgtccgatctcatctgtggcccat
ctgcgcctgcataccaaaccagagcagaaggaattcagtatcccaaagattggacttact
gtggtttttgatgagattgccattgggctttccaaagatcagtatgatgatatactagag
atgatggaatcccttgagagaatgactctgctttctgtgtatcgaaagtaccggcctgac
aaaccactctcaggcaacacagtcttatggtggcattacgcttatgatagcgtactgaat
gaaactgtccggcgtcggcggcagatgtggtcctggcatcacattgcagaacacagaaag
ataatgaagacatatagagaagcataccttatcaagctggacaagaaattgtctgctgct
gttcagaaaatcctggataatagtgaaaaacaactagatgtgttcaacatcaccctcatg
agacagcaagcagaggtgcaggcagccaagcagggtgcacaacgaaaggagagtagttca
aaaagttggtttagtggattgtttggaaaaagaaaatcatcagactcattagaggaagaa
ataaagcctggagaaatgcaggagaaattctacgagttgtacacagcagaggagaaagcc
aaattatacaatgccattggctatgaagaaaatgaaatgaccttggtctatccaaaagag
tacgaagcagtcaaggttgttactaagttcagaaatgttgcaatttttctcagagataga
cagtcaaaagatgttcactttttacatcgtagggagacctttttcagacagcaccagctg
ctaaagctacaactaaaggatgtgtactcctattttgggcaaagacctgcagcaggtgcc
atacatcttgatgctaaaatagacagaatggtggtctctggaacacctcagaacgatgca
gctccacgccttatcacctcccagatacaggacgctaaagagcaaatctactccttggct
aacctctctatagccaccaatcccctggacggcctctgtgacaccaggatcaggttcaaa
gggcggccactggaaattgtttatgatgctgtaactataaacaagctggcagaattcttc
aaacctccaaaatctgttgaattgaaacagctctcccaggcagcaatgtctaagtttgat
gagataaaagagcagtcaacagcgggcatccagcatgcactacagcagcacaaatacaca
gacattggtgtggaccttatgccttccatcattattgtgccagagggtggcttgatgaag
aatgatgttcggaagttgattcttgaccttgggcaattgacagttgtcagtagtaaacat
gatacctccattgatccacagataatgagtgtatttggacaacaagtgttagagctagca
gagaagttgaaaaaagcctatgacaggtttgacatccgacttcagcgcatgcagctgctg
ctcgctaacccaggtgaaaattggcagctggcatgtactgcaggccagtctccacagcat
gtgctgtcacctatggacatcctgcttgatatccgtgtgtgcatctttgacaaagatcca
agaatggccaagacaaaggtacatggagttctgcccaacctcagtcttcgcatttcagac
aaacgtgtccatgagatcatgactttagccctgagcatcccactgccagaatctgcacca
gtagacgaagaaccagaaacagagatgttcaagggccccagtgatcttccagcaagcttg
actgcattatcaacaagcagaatagtgaacaccgccattattgctactgcagaacacact
gataaggaacgtgctccagagctgagacgcctaagttcagtggaatataccaatatgact
gacatggaacttaactttgagatcaaggagatggtagcagtactaagccagagacaaggc
gacacagagataccagtattgaagctaatggtggagtctgttgggactgaagtgcaaatg
aggaggtttgacatgctagttgatgcccatattggcacagtgtatgcccagcatcttaaa
tatcagttgagcaacagaataaacgaagaattgctgtcgactggagctgtgtcatcaggg
ccactcattaatttagtcaacacaccatctgtaggtgaagaccaaaaactgctttctgtt
acctttctacaggccaaaaagacaggcccagagttctccactctataccggaacatagag
aaaaacatccaggtgaatttctcagctgttgagatcctccttcaccagcgtgccatcctt
gatctcatggaattagccaacagtcttgtgcctcctagcactgatgattctcaacagtca
aaaaatctctcagacgacaaggcagaagctggcagtagtcttgagctgtggaaggaaaaa
gagaaaggttcaaagaaaaggaaggaagatcccaatctcatcaacttgaaggtcacagta
gttttaagtaaattttcggttggagtctgcaatgatgaaagactgatcaccaatgtccag
atcaaaggtatttgtgcagaggttgctatacagcaggccagaacaacagtgagtgcaatc
ctcagagaaacaactgtttttgatccagacccacatactcgatatcaccgtatcctctgc
atagaaggcagcaatgtattgaaggctggagcagttgtgtacaacggtggcacagcaggc
aataagtatagtgacatgtcatgttttgatactggtgtggatgtggaaattggatgcatc
aaagttttctttgttaacaagttcatctcagatctgttgggctttatggacaattttcaa
gccgcgaaagaccagatgcaaaaggctggccaggtggcagcacaagttggcatggatact
gtacagtctctgcaggagacagcaacccgtctgttgcttaaggtgaacatgaaagctccg
gtcattgtggtgccacaaaactccacctctagtaacaccctgatgcttgactttggtcag
ttgtccatcaccaactcctttaagttggcaggaaagctttccccaaacaatgtaccagcc
atcttggaggagatgaacattgtgttgacatctttgaaactgtccagggcactgatgaaa
ggggatactgacatttctgctgagtgcttaatcctagaacccttgacagtgtccttgcag
atgagacgtaatctttcagcctcctggtatcatgaaagtcctgaattagaactttgtggg
gcacttgaacccttgaatgttcgattaagtcaaggagactttggtaccatgatgcaaatt
ctgaatgagaacctgcgagaaggacagccacaggctagtacaaagagtaatgctgtagca
tcttctcattcacctgaaaccgtggtaccatctgtcagtacgacctctaaaatgttgaca
gaaatggaaaagcatagacctgaggtctatgtccggatcaaagttgatgtgcagctgaaa
ggggtgatagctgtcttctattctggtgatactgtcctgacaagtggcatctgtaaacgt
gaaccttcaagttctctgggtaaatttgagctggtctccatgtcagcagtagccatcatt
atgtctaacgatgctctaaaggcgaaagtcagcctcaatgacttaattcttgatgacctt
cggctatctaaaagaactggtatcacaaggatgatagagagaagcaaaagtggcagaaat
cattcttcagatatggtctgtgtggacttccagcaagatgctgaaaagtgtctgaatgtc
aagataagcataagcagtctctacatctgtgtatgtgtggagttcttgatgtcactggcc
aacttcttcacccagggtttgggcgaaatttctgatagtgctttaaaacctaaacatgga
gctatgcagtctggtttgactcctccagtacactcagaccaaaaacaagaactgcagata
atggaggtggtgctagagatggagaagccagagatcattcttattgaagatcagatgaac
caaagtaccaaatctcttgctgtggatttggctctgtcgttccgcttgattcagacacct
gaagttcaaaagataaacgccggtattaatgggattcaggtgttcatgtgtacatttgac
agtcgccacatacccagtcatcagatactagtaccttttgacatcagtgtggtcagcagt
gcaccttatggtcaaaatcatcatgttgatgtcactttcagtgacattgtgcttgtgatt
tcaccaagtatcctgacaaccatatctctgatttctaggggattgactcctgagggttca
aaaactagtccattatttctcagtactcttgcatccgtcccaaaatggaaggttcctgca
aatctctgggatgtgaagaccctggcttcatgcaatctttggtacattgaatcagctaaa
caggaaactaaagagcagacttaa
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integrated database retrieval system
