Pomacea canaliculata (golden apple snail): 112557025
Help
Entry
112557025 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112557025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcan03021
]
112557025
Enzymes [BR:
pcan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112557025
Transcription machinery [BR:
pcan03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
112557025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
UNC45-central
Motif
Other DBs
NCBI-GeneID:
112557025
NCBI-ProteinID:
XP_025082376
LinkDB
All DBs
Position
LG1:complement(28798183..28824462)
Genome browser
AA seq
1409 aa
AA seq
DB search
MVKEQFQETDIAKKISHVTFGFMSSEDMQQASHLHVVSKNLYSQDGSRKPVPFGVLDHKM
GTSEKGNNCETCGNELVDCIGHFGYIDLELPVFHIGFFRATITVLQMICKTCSTILLEDD
VKASFLESLKRPNLGYLQLKGLRKKIYDKCRKLSVCPKCGEYNGMVKKCGMLKIVHDKYK
PRRGADCVLKEFVETFENAKRNNKELEALIPKTQEVLNPVIVQKLFQQIAEADIPLLLMN
SSMSRPEDLILTRIFVPPICIRPSVVSDLKSGTNEDDVTMKLTEIIFLNDVIQKHRASGA
KMQMIMEDWDFLQLQVALLYNSETSGIPLHMQPKKPMRGFVQRLKGKQGRFRGNLSGKRV
DYSARSVISPDPNMRIDEVAVPEHVAKILTYRERVTKANLQMMKQLVVNGSVHPGAIVVE
HPEMKDGQVTYHKRNLYFINRQNVANSLKIGDIVERHLLDGDVVLFNRQPSLHKLSIQAF
YARVMPNRTFRFNECCCTPFNADFDGDEMNLHLPQTEEAKAEALILMGSKSNMITPRNGE
PLIAAIQDFLTGAYLITQKDVFFERARACQIASSILAGKDTKLKIELPPPAIWKPCKLWT
GKQLFSLILRPNKQSPVKVNLRTKGKRYTRNEDLCSNDSFVAIRNSELLCGTMDKATLGS
GSKENIFYIILRDFGREHAADALSRLARICPAYLSNRGFSIGIGDVTPGEGLIKAKNKLL
ANGYAKCDEYIRNMEEGKLQTQAGSTEEETLEAVILKELSVIREHAGKSCLQELHKTNSP
LIMAVCGSKGSFINISQMIACVGQQAISGKRVPNGFEDRALPHFERFAKHPAARGFVENS
FYSGLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCVQYDMTVRSSTGEV
VQFRYGGDSLDPAAMEGNDKPLDFQHQLLHILAVTNSEVRNEDSLSDTQLSALVEDVLMK
EEWTRAEESFDDFKKEVKSFMDTLAQRITTSRTKFLKHGEVQNMRALNQLERITNTQVLR
FMEVCLHKYLKANIEPGTVVGAITAQSIGEPGTQMTLKTFHFAGVAAMNITLGVPRIKEI
INASKNISTPIITAPLLIDNDPDEARMVKGRIEKTTLGEVTEYFEEVYLPDNCFILVKLN
LDRIRLLRLEVNVDTITTSIVASKLGVKLSDISIAGPDILTVSGTETSKSSMYYVLQHLK
KNLANVVIKGIPXVTRALISMDEEKKNTYKLFVEGDNLLGVMSTRGVDGTKATSNNTYDV
FRTLGIEAARATIMKEINYTMTSHGMSIDIRHTMLLADLMTFKGEVLGITRFGLAXMKES
VLMLASFEKTADHLFEAAYYGQRDAINGVSECIIMGIPMNLGTGIFKLLYKAERPATGFK
RSLLLKVQTFTFLGPKPSHEVVPFVNFCY
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaggaacagtttcaagaaacggacatcgccaagaaaataagccatgtcactttt
ggatttatgagttcagaggatatgcagcaggcatcacatttacatgtcgtcagcaagaat
ctgtacagccaggatggaagtcgtaaaccagttccatttggggtgcttgatcataagatg
ggaacaagtgaaaagggcaataactgtgagacctgtggaaatgagctagttgactgcatt
ggacattttggctacatcgatttggagttacctgtttttcatattggcttttttagagcc
accattacagtattgcaaatgatctgcaagacatgcagcaccattcttttggaagatgat
gtcaaagccagttttcttgagagtctcaagagacctaaccttggttatttgcagctaaag
gggttgcgaaaaaagatatatgataaatgccgcaaactatctgtctgcccaaagtgtgga
gagtacaatggaatggtaaagaagtgtggaatgctgaagattgttcacgacaaatacaaa
cctcgacgtggtgcagattgtgtgttaaaagagtttgtggaaacctttgaaaatgccaaa
agaaataataaggaactggaagctctgattcctaaaactcaggaggttttaaatccagtt
attgtacagaaactgtttcaacagattgcagaggctgatattcctttgttgttgatgaac
tcatccatgagcaggcctgaagatctgatactcacaaggatttttgttcctccaatctgt
attcgcccttcagttgtttctgacctcaagtctggaacaaatgaagatgatgtgacaatg
aagctgacagagatcattttcttgaatgatgtcatacagaaacacagagcatcaggagcc
aaaatgcaaatgatcatggaggactgggattttctgcagcttcaagtagcgttactttac
aacagtgaaacatcaggcatccctctccacatgcagccaaaaaaaccaatgagaggcttt
gtccaaagactgaaaggaaagcaaggacgctttcgtggcaacctttcaggaaagcgtgtt
gattattcagccagatcagtgatttccccagaccccaacatgcgtattgatgaagttgct
gtgccagaacatgttgccaaaattctgacatacagagaaagagtgacaaaggctaatttg
cagatgatgaaacagctggttgtgaatggcagtgtccatcctggtgcaattgttgttgaa
catcctgaaatgaaggatggtcaggtaacatatcataaaaggaatttgtactttattaat
cggcaaaatgtagccaactccctgaagattggtgatatagtagagcggcatttgcttgat
ggagatgttgtcctcttcaatcggcagccttccttgcacaagctcagcattcaagctttt
tatgctagggtgatgccaaacagaacatttcgatttaatgaatgttgctgcacccccttc
aatgcagactttgatggtgatgaaatgaacctgcatctgcctcaaacagaagaagcaaaa
gcagaagctttaattcttatgggatcaaaatctaatatgattacaccacggaatggagag
ccactgatagcagctattcaggactttctcacaggagcttaccttattacacaaaaagat
gtcttctttgagagggctcgagcttgtcagattgcatcttccattctagctggtaaagat
accaagctgaaaattgaattgcctccacctgccatctggaagccatgcaaactgtggacg
ggaaagcagcttttcagccttattcttagacccaacaaacagtctcctgtcaaggttaat
ttgagaaccaaagggaagagatatacacgaaatgaagacctttgcagcaatgattcattt
gttgccattcggaacagtgagctgttgtgtggaaccatggacaaagcaactctgggatca
ggatccaaagaaaacatcttttatatcatcttgcgtgactttgggcgagaacatgctgct
gatgctttgtctcgactagctcgaatctgcccagcatatctctccaatcgtggattttca
attggcattggggatgtcacaccaggtgaaggtctcatcaaagctaagaataagctgctg
gcaaatggttatgccaaatgtgatgagtacattcgaaacatggaagaggggaagttacag
acacaggcagggtcaacagaggaagaaacgcttgaggctgtgattttgaaggaattgtct
gtcatccgagaacatgctggcaaatcttgcctgcaagaattgcacaagaccaacagccct
ctcatcatggccgtctgtggttctaaaggttccttcattaacatctcccaaatgatagct
tgtgtgggacagcaagccataagtggcaagagagtgccaaatggctttgaagatcgtgct
cttccacattttgaaagatttgcaaaacatccagcagcaagaggatttgtagaaaacagc
ttttattctggtttaacacccactgaattcttcttccacacgatggctggacgagagggg
ttggtagacacggcagtaaaaacagcagagacaggatacatgcagcgccgactggtcaag
tcacttgaggacctgtgtgtgcaatatgacatgactgtgcggtcttccactggagaggta
gtacaattcagatatggaggagatagtttagatcctgctgccatggaaggcaatgacaag
cccttagattttcagcatcagctgctgcacattttggctgtgactaacagtgaagtacga
aatgaagactctttatctgatacccagctgagtgcattagtggaagatgtgctgatgaaa
gaagaatggacaagagcagaagaaagttttgatgactttaagaaagaagtcaagagtttt
atggacactttggctcagagaataaccacttcgaggacaaagtttctaaagcatggagaa
gtgcaaaatatgagagcattgaaccaactggaacgcatcaccaacactcaagtccttcga
tttatggaagtctgtctccataaatacctgaaagcaaacattgagccaggcactgttgtt
ggtgccattactgcacaatccattggagagccaggcactcagatgacactgaagactttc
cattttgctggtgttgctgcaatgaacattacacttggtgtgccacgcatcaaggaaatc
attaatgcatctaagaatatcagtacacctattattaccgcaccccttctaattgacaat
gacccagatgaagcacgtatggtcaaaggaagaatagaaaagaccacacttggagaggtg
accgagtatttcgaagaagtttatctacctgataactgttttattcttgtaaaactgaac
ctggatcgcattcgtcttctgcggctggaagtgaatgtggacacaataactacatcaatt
gttgcatctaaacttggagtcaagttgtctgacatcagtattgctgggcctgatattctg
actgtgtctggaacagagactagcaagagcagcatgtactatgttctgcaacatctaaaa
aagaaccttgcaaatgttgtcatcaagggtattcctnttgtgacacgggcattgatcagt
atggacgaagagaagaaaaatacgtacaagctttttgttgagggagacaacctgcttggt
gttatgagtactcgtggggtggatggaactaaagccacgtccaataacacctatgatgtt
tttcgtactctgggtattgaagcagcacgagcaaccatcatgaaagaaatcaattacaca
atgaccagtcatggcatgagcattgacattcgccatactatgctcctagcagatctcatg
actttcaaaggagaggtcttaggcatcacaagatttggattggccnaaatgaaggaaagt
gtccttatgctggcatcttttgaaaagactgcagatcatctgttcgaggctgcctattat
ggacagcgagatgcaattaatggagtcagtgaatgcatcatcatgggcattcccatgaac
ttggggactggaatcttcaagctgttgtacaaagcagagagaccagcaacaggcttcaag
cgttcacttctgttgaaagtccagactttcacattcctgggacccaaacccagtcatgaa
gttgtgccatttgttaacttttgttattga
DBGET
integrated database retrieval system
