Pomacea canaliculata (golden apple snail): 112558036
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Entry
112558036 CDS
T05881
Name
(RefSeq) protocadherin Fat 4-like
KO
K16507
protocadherin-16/23
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
112558036
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcan04515
]
112558036
Cell adhesion molecules [BR:
pcan04515
]
Cadherins
Cadherin related
112558036
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
MpPF1
Motif
Other DBs
NCBI-GeneID:
112558036
NCBI-ProteinID:
XP_025084010
LinkDB
All DBs
Position
LG1:complement(455168..487089)
Genome browser
AA seq
1748 aa
AA seq
DB search
MIKTSDTLLLPQIPTHRKSSRLVTIYSLGIQRLKSSSQCLTPGTITILQSLLSDNKYQTS
YTLEVQVEDGGGLTARQTVIIPVDRNLNVPRFTGQLNFVVNISETSQLLDTIVNVTGTDG
DQSIWGQLSYRIIDDGSGTTSYFDVRTSGTNGEVYLKRSLAKSGRNQYVFVIELRDLGIP
TSLLATDRVYITVNAIRNNQPPLFFGDVYNVTISERESVGYSVVRVFANDSDPSPFNSIT
YSILPDRYTLSHNFFAVDNINGQITVAANLQSTPTDLFLITVQAADSGSPQRVAYALVYC
YVLRNFETPVWPQPSYSVTIPEIQAIGTSFLTVTANDRDSQPPNNRVTCYLTGDTAAQTY
FDVVTVSNNNGVNTCQLRVRVPLVYDSNRPASYNVRVKAVDGGYSQRESVELPVQVFISR
NQYPPVFVGDPYEVLVHMPVSAGQVLTTVTARDEDTVYPFGTITYSLIAPSNTPQLFAVN
STGHITLVSAASLSGAQEEYITYVQAADGGIPSLTDIALVRVIVDRNQNAPTFSSTSTVI
PITEDSSPGNIIGNCIATDADSFVANSLPENYKITYTSSATSNALAYFGVDPTNSNIFIR
RDLVGDQSPSNGQYILVLTAVDSAQYPRSAPNSCTVTINVERNRYPPVWQNLPYDFTVTR
QALAGSTVSNKILATDADAPGQYGQVRYRLVEQGVPGLFAINESTGLLVLNTSISTQSNN
IFYLVVEAYNMGNRPQRIYERIIVRVDQNLFAPTIDFPGVSVGYKDTVEILETRPVNSAF
YKVSASDADGSGPYGTVYYYLVSGQPVIEKFFQVNDQTGDVSLRSTVVDEPELLYQVLIS
ARDRDSVPKSSTATATLSVSVYRNTYAPQFQNVASYATVINEDISVPSVVTRVTATDADK
PNTYEQVSFKLIGDTFFNLFRINNAGEVTLYNSLRGITQDYFLLQVQAFDNGSPPLINET
IFRITVNRNLKTPQWNDTNYEVNISSTQAVDSVLLNLRAYDSDTTAPYNQIEFFPINSSD
PAFSWFQFSATGALSVRVPLYTDINKTSRFQWRMGVRDKGTPPQVQTQQATVTVNVFHNQ
RTPQFSNCPTTIAMKEDVPTGQSVYFITVTDQDTPPFNQVDLQLIGDGGAVGLFQLRESP
SRLVLTGSLAADSTELYRLRIMAQDKGVPPLTSTCVVTVTVDHNLQSPAFQSQVYRAAVS
ECAPFGLSVLSVRATDGDKFSPYNQVTFTVANQYFAVETQSDGSGLIYLKGDLRTDPQNP
SEYRVLVVATDGGRRTDNTTVTISVSRNMVNPTFVDVTNSNYNITIDNDVSISTPVYNAQ
ATDSGNFSKLTFTLLGDTTALQNFVMDPSTGVISPSRSLLAQEGNYLLEMQVCDDGCPNK
CAIKLLTVNVNRNRFSPVFASNSYAAVISEEASFGTSILSVTASDADVVAIYKKVSYELV
APNNLFDLNSVTGAITVKADLTKATLNTQSFDVSAIDGGGRRSTVNAQVVITIIRNNYDP
VFSASSCSASLDPGTNTGTPVVTVSASDSDPDVLGNTNVPSYFGSASLSYSLIGDDGNQN
KFAIGSNGQITLQISIANDSTETYRVRVQVRDGAKNYRSNIKVCSISVTRNQNSPQVLVA
APSTTILEIVNTGTIVQNISYTDADTSSPNNQVTFTLTGQPECISYFGILSNGGLYVRQD
LVPDTRTQYICNIMATDLGSPARNSSNTGTVTISVVRNRAPSFDRSSYTGQINRDATDGA
VITSFNCH
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaacttcagatacactgttgctgccacagatcccaacacacagaaagagttcc
agattagtaactatttactcattggggattcagaggctaaaaagttcttcacaatgtcta
acaccgggaaccattaccattcttcagtccctgttgagtgacaacaagtaccaaaccagt
tacactctggaggtgcaagtggaagatggtgggggactgactgcacgacagactgtcatc
attccagtcgatcgtaacctcaatgtgccacgcttcactgggcagctgaactttgttgtc
aatatatcagagactagccaacttcttgacaccatagtcaatgtcactggtacagatggt
gaccagagcatatggggtcagctaagttaccgtatcatagacgatggctcaggcacaaca
agctactttgatgttcgaacctcaggaactaatggagaggtctacctgaagcggtcattg
gcaaagtctggccgaaaccaatatgtgtttgtgattgagctacgtgatcttggaatacca
acaagtctgcttgctacagacagagtttacatcactgtcaatgcgattcgcaacaaccag
cccccactgttttttggtgatgtttacaatgtcaccatcagtgaaagagaatcagtggga
tattcggtggtgcgagtgtttgctaatgacagtgatccatcaccctttaacagtatcaca
tattccatattgcctgaccgctacacactcagccacaacttctttgctgtggataatatt
aatggacagatcactgtcgctgcaaacctgcagtccactcctactgatcttttcctgatt
actgtgcaagcagcagacagtggatcacctcagcgtgttgcatatgctcttgtgtactgc
tatgtgctacgtaattttgagacccctgtctggcctcagccaagctatagtgtcaccatt
cctgaaattcaagctattggaacttcatttctcacagttacagcaaatgacagagatagc
cagccccccaacaacagggtgacttgctatctgacaggtgatacagctgcgcagacatac
tttgatgtggtaacagtgagcaataacaatggtgtcaatacctgtcaattgcgagtacgt
gtaccacttgtgtatgattccaacagaccagccagctataatgttcgagttaaggcagtg
gatggtggatattctcagagagagtctgtggaactgcctgtgcaagtttttattagccgc
aatcagtatccacctgtatttgttggagacccttatgaggtcctagttcacatgccagtc
agtgcaggacaggtgctgaccacagtcacggctagagatgaagatactgtatatccattt
ggaaccatcacctacagcctgattgcaccttcaaacactccacagctatttgcagtaaac
tctactgggcatataactttggtatctgctgcctcccttagcggcgcacaggaagagtac
attacttacgttcaagctgctgacggtggtattccaagtctgacagacattgcattagtg
agggtcatcgttgaccgcaaccagaatgcaccgaccttttcttccaccagcactgtcatc
cccattactgaggacagcagtcctggcaacatcattggaaactgcatagccacagatgct
gattcattcgtagcaaactctttgcctgagaactacaagatcacatacacatccagcgcc
acctctaatgccctggcctattttggcgttgatccgacgaacagcaacattttcatcagg
agggaccttgttggtgatcagtctcctagcaatggtcaatacattttggtgctaacagca
gttgacagtgctcaatatcccagatcagcaccaaactcctgcacagtgacaatcaatgtt
gagcgaaaccgctatcctccagtgtggcagaacttgccctatgacttcaccgtcactcgt
caggctctagctggcagcactgtgtctaacaagattctagccacagatgctgacgctcct
ggacagtatggccaagtccgttaccgccttgtagagcagggtgtgcctggcctttttgcc
atcaatgagtctacaggtcttctggtgctaaataccagtatcagcactcagtcaaataac
atcttctatctggtggtggaagcctacaacatgggcaaccgacctcagaggatctatgag
cgaataatagtacgagttgatcagaacctgtttgctcccacaatcgactttcctggagta
tcggttgggtacaaggatactgtggaaattttagagacaaggcctgtcaacagtgccttt
tacaaagtcagtgccagcgatgctgatggaagtgggccgtatggaacagtctactactac
ttggtcagtggacaaccagtcattgagaagttttttcaagtgaatgaccaaactggagat
gtgtctcttcgctccactgttgttgatgagcctgaattgttgtatcaggtgttgatctct
gctcgtgaccgggattctgtgccaaagtcatctacagccacagctaccttgtctgtcagt
gtgtatcggaacacatatgctcctcagtttcagaatgtagcctcttatgccactgtcatc
aacgaggacatcagtgtgccctctgttgttacaagggtgacagcaacggatgcagacaag
ccaaacacttatgaacaggtgtctttcaagctgataggagacacattttttaacctattc
cgaatcaacaatgctggagaggtgacattgtacaactcgctccgtggcataacacaggac
tactttcttcttcaagttcaagcttttgacaatggctctcctcctctcatcaatgagaca
atttttcgcatcactgtgaacagaaaccttaaaactccacagtggaatgatacaaactat
gaagtgaacatttcatcaactcaggcagttgacagtgtcctcctgaatctaagagcttat
gattctgatacaacggcaccttacaatcagattgagttcttccccatcaatagtagtgac
ccagccttcagttggttccagttcagtgccacaggtgctctttctgttcgtgttcctctc
tacactgacatcaataaaacttcgcggttccagtggcgtatgggagttagagataagggc
accccacctcaggtacagactcagcaagcaacagtgactgttaatgtcttccataatcaa
agaacccctcagttctccaattgtcccaccaccattgcaatgaaagaggatgtaccaact
ggacagtctgtgtattttattacagttacagatcaggacacaccgccatttaaccaagtt
gacttacaacttattggagatggtggtgcagtgggcctcttccagctgagagagtcacct
agccgacttgtgcttactggcagcttggcagcagatagtactgaactttacagactgcgt
ataatggcgcaagataaaggagtaccaccactgacatcgacttgcgttgttactgtgact
gtagaccacaacttacagtcaccagccttccaatctcaggtctacagggcagctgtgtca
gagtgtgctccctttgggctgtctgttctctcagtccgagctactgatggtgacaaattt
agtccctacaatcaagtgacattcactgtggcaaaccagtactttgctgtggagactcaa
agtgatggtagtggtctgatttatctgaagggagacttgcgtacagacccacagaatcca
agcgagtacagggtgctagtagttgctactgatggtggcagaagaacagataacaccaca
gtcacaatcagtgtttcacgcaacatggtgaaccccacatttgttgatgtcaccaacagc
aactacaacatcaccattgacaacgatgtttctatcagtactcctgtgtataatgcacag
gctacagactcaggcaacttctctaaactgacatttacattgcttggagacacaacagct
ttgcaaaactttgtcatggacccatctactggggtaatctcaccatcacgctctctgctg
gcgcaagaaggcaactacctgctggaaatgcaagtgtgtgatgatggctgtcccaacaaa
tgtgccatcaaactgttgactgtcaacgtcaatcgcaaccgtttttctcccgtgtttgct
tcaaattcctatgcagctgtcatatctgaggaagcttcatttggtacttccattctttct
gttacggcctctgatgctgatgttgtggctatctacaaaaaggtgtcgtatgaacttgtg
gcacctaacaatctttttgatctgaattctgtcactggtgccatcactgtcaaagctgac
ctgacaaaggcgactctcaacacccagtcttttgatgtttctgccattgatggtggggga
cgacgcagcactgtcaatgctcaggtagtgattaccatcatccgcaacaactacgaccct
gtgttctcggccagtagctgcagcgctagtcttgatcctggcacaaacactggcacacca
gttgtgacagtctctgcttccgacagtgaccctgatgttcttgggaatactaatgtgcct
agctactttggttcagccagtttgagctacagtctgataggagatgatggcaaccagaat
aaatttgccattggcagtaatggtcagataactcttcaaatcagtattgcaaatgacagt
actgaaacctacagggttcgtgttcaagttagagatggtgccaagaactacaggtccaac
atcaaggtatgctccatcagtgtgactcgtaatcagaacagcccacaagtcttggtggca
gcacctagtaccaccatacttgaaatcgtcaacactggcactattgtgcaaaatataagt
tacacagatgctgacacttctagtcctaacaaccaggtgaccttcacactgacaggccag
ccagagtgcatcagctattttggcattttatctaatggtggactgtatgttcggcaagat
ttggtaccagatacacgcactcagtacatttgtaatataatggccactgatcttggatct
ccagcaaggaattcttcaaacacaggaactgttaccatcagcgttgttcgcaatcgagct
ccttcatttgacagatcatcatacactggccagattaacagagatgctactgatggtgct
gtcattacatcatttaactgtcactga
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integrated database retrieval system
