Pomacea canaliculata (golden apple snail): 112558305
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Entry
112558305 CDS
T05881
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
112558305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcan03036
]
112558305
03400 DNA repair and recombination proteins [BR:
pcan03400
]
112558305
Chromosome and associated proteins [BR:
pcan03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
112558305
DNA repair and recombination proteins [BR:
pcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
112558305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Herpes_UL25
Motif
Other DBs
NCBI-GeneID:
112558305
NCBI-ProteinID:
XP_025084483
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All DBs
Position
LG1:complement(4457896..4471612)
Genome browser
AA seq
1353 aa
AA seq
DB search
MDSKPQQGITKSSEKHKMDNDDHGNELSEMADKDGLFKVDTGLIPQALLGDQASELVGLG
LSVFNQDEFEEGVMKQVDQAMAKEELERLKRILQKELKSIEEDMKLVESDLEHISKAEMT
VEQQNATAREIHHRQQAIRKQKETRRSHLKTLQVRQKMALAKMKNIEEAERGDPDIEEEE
QGSADHPFCGLNGQPQKESARDRMIRLGEMTPFGTVLHGATAKGESSGSKLSAFEQFLLD
KQKNFRIKDKKPLKKNSLSSSQHRHHSKKSSDKASSSSSSTQPFSIFHKKDKKANIEQVD
NVQKVFQRKRSYPVAPDLSEDGEIRDENCDKDKQILENSDSDYEPECTDNDDSEGEKRQR
KVRGKQLLKKTNAVYRPSDDEDEPVSKRKPDRSIAREKDDADENYYQRRLRIQQQRKEQD
DSGDEEFEGGLIVPGKLWKKLYKYQKTGVRWLWELHMQQAGGIIGDEMGLGKTIQMIAFL
AAMKESRLHSKDFPYVGLGPVVIVCPTTVMHQWVREFHTWWPDFRVAILHSSGSYTGSEA
QLVRNIVKSNGVLVTSFNTLVIQQDILLPYNWHYIVLDEGHKIRNPDAQITLCCKQFRTP
HRLILSGSPIQNNLKELWSLFDFVFPGKLGTLPDFMAHFSIPIVQGGYANATQVQVETAY
KCACVLRDSINPYLLRRMKADVKTSLDLPNKNEQILFCRLTDEQREVYKEYLDSRECHAI
LAGKFQVFAGLITLRKICNHPDLSTGGPRVLVGQDISGRPELHYGFWHRSGKMVVIEALL
KLWHQQGQRVLLFSQSRAMLDIIESFIQERNYTYLRMDGSTSISSRQPLVLQYNKDPSIY
IFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDMQARERAWRIGQTRQVTIYRLLTSGTI
EEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLGEKDEHRTETSAIFAGTGSDV
KMPRRLAVPPIPTPKLLKPNRFDEMKKQSKLEDDFYTSSLDNSEVEKMRELARKLSRKME
EEKLQKLKSTEIGTQSHPDSSATSEQFVGSARKTRREESSLLSSRHPFGKDCKKRKKDAK
FEGQRIPHLVKSCEYKSQAANEQGQEDALSKHQDDYVLRRLFKKTGIQAVMKHDKIVDSS
HADYALVEAEATKVAREAVAALRRSRAMCMPAVSGVPTWTGQHGGPLSKPRFGQKKNGQL
VPKAEETTKPSANPTKPAGELSSKKSLDKSSLFDGSQAGGILLGAEQEAMSSSELLTCMH
KRKQFGAQPDASMDNMPSSSISRDDQELLEDLRNFIAFMSDINGQATTHELLTNFGPRLP
PSDSAKFKAMLVQICNFNKVDGLGIWRLKQEFR
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggattccaaacctcaacaaggaataacgaaaagcagtgaaaagcacaagatggataat
gatgatcatgggaatgaattatcagaaatggctgataaagatgggctgtttaaggtagat
acaggtcttattcctcaggctttgttgggtgaccaggcatcagagctagtggggttagga
ctgagtgtctttaaccaggatgaatttgaagaaggggtgatgaaacaggttgaccaggct
atggcaaaagaggagttggaacgtttaaagagaatactgcagaaggaactgaaatccatt
gaagaagacatgaagttggttgaaagtgatcttgagcatattagtaaagcagaaatgact
gtagagcagcaaaatgcaacagcaagggaaattcatcatcgtcagcaagctataaggaaa
cagaaggaaacaaggaggagccatctaaagacactgcaagtcaggcagaaaatggcactg
gccaaaatgaagaatatagaagaagctgaaagaggagatccagatatcgaagaagaagag
cagggctctgctgatcaccctttttgtggtctaaatgggcaaccccagaaagaatcagca
cgcgatagaatgatccggttgggagagatgacaccatttgggacagtactccatggagct
acagcaaagggagagagctcagggtcaaaactctctgcctttgagcagtttttattggac
aaacagaaaaactttagaataaaagacaagaaaccattaaagaagaactctttgtcttct
tcacaacataggcatcattctaaaaaatcatcagataaggcttcatcctccagttcttca
acacagcctttcagcatattccataaaaaagataaaaaagccaacattgaacaagttgat
aatgtgcagaaagtgtttcagaggaaacgttcctatccagtagctcctgacttgagtgag
gatggtgagatcagggatgaaaattgtgacaaggacaaacaaattcttgagaatagtgat
tctgattatgagcctgaatgcacagataatgatgactctgaaggtgaaaaaagacagaga
aaagtgagaggcaagcagctacttaagaagacaaatgcagtttacaggccaagtgatgat
gaggatgaaccagtatctaaaagaaaacctgatcgatctattgctagggaaaaggatgat
gctgatgaaaactattatcagagaaggctaaggattcagcaacaaaggaaggaacaagat
gacagtggagatgaggagtttgagggaggactgattgtccctggaaaattgtggaaaaaa
ctttacaagtatcaaaaaacaggtgtccgatggctttgggagcttcacatgcagcaggca
gggggcatcattggagatgaaatgggcttaggaaagacaattcaaatgattgcttttctt
gcagcaatgaaagaaagccgactgcacagcaaggacttcccgtatgtgggtcttggacca
gtggtgatagtatgtccaacaacagtcatgcatcaatgggtcagagaatttcacacatgg
tggccagatttccgtgttgcaattctccactcatctggatcctacactggctctgaggca
cagctggttcgtaacattgtgaagtctaatggagtgttggtgacatctttcaacactcta
gtaatacaacaagatattttgctgccatataactggcattacatcgtgttggatgaaggc
cacaagatccgcaaccctgatgctcagattactctgtgctgtaaacagtttcgtactcct
catcgcctcatcctgtctggatctccaattcagaacaatttgaaggagttgtggtcttta
tttgactttgtatttcctggcaaattgggtactttacctgacttcatggcacacttttcc
attcctattgtccagggagggtatgccaatgctactcaagttcaggtagaaacagcctat
aaatgtgcctgtgtattgcgagactcaataaacccttacttgctgcgaagaatgaaagca
gatgtgaaaactagcttggatctgcctaacaagaatgaacagattttgttctgccgattg
actgatgaacagcgagaagtatacaaagaatatctggattccagggagtgtcatgccatt
ttagcaggaaagtttcaggtgtttgctggccttattaccttgagaaaaatctgcaaccat
ccagatttatcaaccggtggcccacgggtacttgttgggcaagacatcagtggcaggcca
gaacttcactatgggttctggcatcgctctgggaagatggttgttattgaggcattgctg
aaactgtggcaccagcagggacagagagtgctgctgttctctcagagcagagctatgctg
gacattattgagagctttattcaagaaaggaactacacttacctgcgtatggatggttct
acttctatttcctctcgccagcctcttgttcttcagtacaacaaggacccctcaatctac
atattcctcctgaccacaagagtaggtggacttggtgtcaatctgacaggagccaaccgt
gtcatcatatatgatcctgactggaaccccagcacagacatgcaggctcgtgaacgagct
tggcgtattgggcagacacgccaggtcacaatttataggctgcttacctcaggcaccatt
gaagaaaagatatatcatagacaaatctttaaacagttcctcacaaatcgtgtactgaag
gaccccaaacaacgtcgttttttcaagtcaaatgacatctatgagctctttacacttggt
gaaaaagatgagcacagaacagaaactagcgccatttttgctggaacaggatctgatgtt
aagatgcccaggcgattggccgtgccacccatacctaccccaaagttgctgaaacccaat
aggtttgatgaaatgaagaagcagtccaaacttgaagatgatttttacacaagcagccta
gataactctgaggttgaaaagatgagggagttagctcgcaaactgagccgaaagatggag
gaagaaaagttacagaaacttaagtccactgaaattggaacccagtcacatcctgacagc
agtgcaacttctgagcagtttgtggggtcagcaagaaaaacaagaagggaagagagcagc
ttattgagctccaggcatccatttgggaaagattgcaagaaaagaaaaaaagatgccaaa
tttgaaggtcagcgcatcccacacctggtgaagagctgcgagtacaaatctcaggctgcc
aatgagcagggacaagaagatgcacttagcaagcatcaagatgactatgtattgcgcaga
ctgtttaaaaaaacaggtattcaagctgtaatgaaacacgataaaattgtggattcgagt
catgcagactatgcccttgttgaggcagaagctaccaaagtagctcgagaggctgtggct
gccttgcgccgatctcgggccatgtgcatgcccgctgtcagtggtgttccaacttggact
ggacagcatgggggtccattgtccaaaccaaggtttggacagaagaagaatggtcaattg
gtacctaaagcagaagaaactacaaaaccttcagctaacccaacaaagccagcaggagag
ttgtcaagcaaaaagtcattggataagtcatctttatttgatggctcacaagctggtggc
attttgcttggtgctgagcaggaagcaatgtcatcttctgaactgttaacatgcatgcac
aagcgcaagcaatttggggcacagccagatgccagcatggataacatgccctcaagcagc
atcagcagggatgatcaagaattgctcgaagatttgcgaaatttcatagcattcatgagt
gacatcaatgggcaggctaccactcatgaactcttgacaaactttggtcctcgtctacca
ccatcagattcagccaaattcaaggcaatgctggttcaaatttgcaactttaacaaggtt
gacgggttgggcatttggaggctaaagcaagagtttcgatag
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