Pomacea canaliculata (golden apple snail): 112558516
Help
Entry
112558516 CDS
T05881
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03015
mRNA surveillance pathway
pcan03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112558516
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112558516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112558516
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
112558516
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
112558516
NCBI-ProteinID:
XP_025084785
LinkDB
All DBs
Position
LG3:complement(12328758..12359879)
Genome browser
AA seq
602 aa
AA seq
DB search
MADSVDIDLYDNIEDEFNQDAEFGGGGDLYDDVITAGSSGSMSGRPPSADSSSKAPHSQH
SSSSLTSSNYTGKKYMLYIGNLTWWTTDQDLTDAISACGVSDLLEIKFNENRANGQSKGF
ALVVVGSEASSRHIFERLSRKELHGQVPQVTHYTKQALSQFEAQARKGGELPQNGNFRER
DRELDSFNFSKLRGNSKNQPPPPQPGRPGFPPRLQQPPPPRPGLPAGGPPPPGPPVSFAP
PPGSLPPVSGPPPGALPPGVPRPAVPPGVPRMDLGPSRVPPPGARGPPPMDNRGPPPRHE
WDQRMPMTFTGNGQPPPPGAPFPTSGPPPTQPIPPPGVRPPVPGVRPFIPASFVDLGGPP
PHLPPVSASPLQGPPPPAPHVNPAFFAPPPTHAQAPLPVMTHPPPADPYARPPPVSHPSD
QYGRPILDSSSQRRHEPPPPAISDQEFEEIFQRNKTVSSSAINRAVMDASSGDFASAIET
LVTAISLIKQSKIASDDRCKILISSLQDTLHGIEEKSYGSSRGSSGGRRSRSRDRDRERE
RGEKRSRSHRSRSRDREYRERSRDRERHYDERHRERERGERERSDREREREYASSSSGRS
RH
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcggatagcgttgatattgacttgtacgataacatagaagatgaattcaatcaggat
gcagagtttggtggtggaggggatctttatgatgatgtcattacagctgggtcttctggt
agcatgtcaggaaggccaccttcagcagacagtagcagcaaagccccacattcccagcat
tcaagttcatctctcacctcttcaaactatacaggaaaaaagtatatgttgtatattgga
aaccttacttggtggacaacagatcaggatttaacagatgccatttcagcctgtggtgta
agcgacttgctggagatcaaattcaatgagaacagggctaatgggcagtcgaaaggtttt
gcgctagttgtggttggctctgaagcatcctccagacatatttttgaaagactgtctcga
aaggagctacatgggcaagtaccccaagtgactcactataccaagcaagcacttagtcag
tttgaagctcaagcacgcaaaggcggagaattaccacagaatggaaacttccgggaaaga
gatcgtgagttggacagcttcaacttttccaaactacgaggcaacagcaagaaccagcca
ccaccaccccaacctggtcgaccagggttcccccctcgcttgcagcagcctccccctcct
aggccaggtttgcctgctggaggacctcctccacctggccctcctgtttcctttgcccct
ccacctggttccttgccaccagtatcaggccctcctcctggggctcttcctcctggagta
ccacgccctgctgtacctccaggtgtgccccgcatggacttaggtccttcccgtgtccca
ccacctggtgcaagaggaccaccaccaatggataatcgtggccccccaccccgtcatgag
tgggaccagcgaatgccaatgaccttcactggcaatggacagcctcctccaccaggagca
ccttttcctacaagtgggccaccaccaacacagcctattcctccacctggtgtgcgccct
ccagtccctggagttagacctttcattccagcatcttttgtggacctagggggaccacca
ccacatctaccaccagtctctgcatcccctctccaaggacccccacctccagcacctcac
gtcaatcctgctttctttgctccacctcctactcatgctcaggcacctttaccagtgatg
actcatccacctcctgctgacccatatgcacgtccaccacctgtttcacacccaagtgac
cagtatggtcgccctattttggacagctcctcacagcgccgccatgaacctccacctcct
gctattagtgaccaggagtttgaggaaatctttcaacgcaacaaaactgtatcatcttct
gcaatcaaccgtgctgtaatggatgctagttctggtgactttgccagtgcaattgagact
ctggtgactgcaatctcccttattaagcagtccaaaattgcatccgatgacagatgtaaa
attcttatcagctccttgcaagacacattgcatggaattgaggaaaaatcatacggctca
agccgtggaagcagtggcggccgccgttccaggtcccgtgacagagaccgtgaaagagag
cggggtgagaagcgatcacgcagtcatcgttcacgcagtcgtgaccgcgagtaccgggaa
cgcagtcgtgatcgggagcgccactatgacgagcgtcaccgtgaaagggagcgtggtgag
agggagcgcagcgatagagagcgagagcgggaatatgcttccagcagctctgggcgcagt
cgccactaa
DBGET
integrated database retrieval system
